Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-202P-201ENST00000515998 96 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 AP003467.2-201ENST00000520175 319 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP4O75379 RPL21P5-201ENST00000554662 472 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.62□□□□□ -1.51
VAMP4O75379 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP4O75379 MIR4637-201ENST00000582405 84 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP4O75379 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP4O75379 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP4O75379 AP005264.7-201ENST00000625003 745 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 PISRT1-201ENST00000626175 531 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 AC092162.3-201ENST00000624511 1624 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP4O75379 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP4O75379 AC008079.2-201ENST00000623543 20396 ntBASIC5.62□□□□□ -1.51
VAMP4O75379 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VAMP4O75379 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP4O75379 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP4O75379 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP4O75379 MAPK10-286ENST00000641208 8747 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC019155.1-201ENST00000382242 574 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 Y_RNA.573-201ENST00000384763 105 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AL121972.1-201ENST00000402023 252 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP4O75379 RNU4-25P-201ENST00000410569 230 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC008280.1-201ENST00000418851 412 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC069157.1-201ENST00000421749 137 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 USP9YP4-201ENST00000424401 1745 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VAMP4O75379 RPS20P1-201ENST00000434853 354 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 ARPC3P5-201ENST00000448802 534 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 OR6K1P-201ENST00000456766 971 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP4O75379 AP000942.1-201ENST00000463969 747 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC092757.1-201ENST00000467293 467 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC017015.1-201ENST00000477387 286 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 RN7SL481P-201ENST00000477764 299 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 RN7SL691P-201ENST00000494487 301 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC069439.1-201ENST00000494739 167 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC046134.1-201ENST00000514454 666 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC009643.1-201ENST00000532030 391 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.61□□□□□ -1.51
VAMP4O75379 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP4O75379 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP4O75379 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 AL157687.1-201ENST00000554853 619 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 HSPE1P3-201ENST00000559254 309 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP4O75379 HMGB1P33-201ENST00000563485 527 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 BNIP3P11-201ENST00000603878 563 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC008277.2-201ENST00000605196 797 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 BCRP9-201ENST00000605312 388 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC016727.1-205ENST00000605437 569 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC091979.2-201ENST00000607514 214 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.61□□□□□ -1.51
VAMP4O75379 AL021997.2-201ENST00000615674 271 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC012150.2-201ENST00000621300 544 ntBASIC5.61□□□□□ -1.51
VAMP4O75379 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP4O75379 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP4O75379 AC097504.1-201ENST00000515103 2415 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VAMP4O75379 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 AC009313.2-201ENST00000417893 1941 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 RNU1-132P-201ENST00000364300 164 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP4O75379 RNU6-444P-201ENST00000383988 108 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 RNU6-1103P-201ENST00000384150 107 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 RNU6-769P-201ENST00000384407 104 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP4O75379 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 NPM1P34-201ENST00000428821 893 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms