Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.9□□□□□ -1.79
LDB3O75112 RNA5SP360-201ENST00000516555 118 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RNU6-405P-201ENST00000516637 110 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.9□□□□□ -1.79
LDB3O75112 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB3O75112 AC022882.1-201ENST00000532142 501 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.9□□□□□ -1.79
LDB3O75112 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.9□□□□□ -1.79
LDB3O75112 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB3O75112 RN7SL600P-201ENST00000581811 299 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB3O75112 AC115621.1-201ENST00000604653 858 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AL590392.1-201ENST00000604960 446 ntBASIC3.9□□□□□ -1.79
LDB3O75112 MIR432-201ENST00000606207 94 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AL513477.2-201ENST00000607858 568 ntBASIC3.9□□□□□ -1.79
LDB3O75112 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.9□□□□□ -1.79
LDB3O75112 MIR7702-201ENST00000621931 59 ntBASIC3.9□□□□□ -1.79
LDB3O75112 MIR6810-201ENST00000622701 70 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AL356121.2-201ENST00000624715 780 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC244258.1-201ENST00000637553 1071 ntBASIC3.9□□□□□ -1.79
LDB3O75112 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 AC011978.2-201ENST00000569835 2054 ntBASIC3.9□□□□□ -1.79
LDB3O75112 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB3O75112 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.89□□□□□ -1.79
LDB3O75112 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 RNU6-867P-201ENST00000364956 107 ntBASIC3.89□□□□□ -1.79
LDB3O75112 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LDB3O75112 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB3O75112 Z99497.1-201ENST00000421282 135 ntBASIC3.89□□□□□ -1.79
LDB3O75112 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB3O75112 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 NEK4P1-201ENST00000433383 879 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC006011.1-201ENST00000442758 349 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AC073587.1-201ENST00000447093 876 ntBASIC3.89□□□□□ -1.79
LDB3O75112 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 SLC31A1P1-201ENST00000451221 567 ntBASIC3.89□□□□□ -1.79
LDB3O75112 RPL23AP35-201ENST00000451906 501 ntBASIC3.89□□□□□ -1.79
LDB3O75112 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.89□□□□□ -1.79
LDB3O75112 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 CDC42P4-201ENST00000510507 563 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB3O75112 AP000790.1-201ENST00000528891 737 ntBASIC3.89□□□□□ -1.79
LDB3O75112 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB3O75112 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB3O75112 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB3O75112 AC090502.2-201ENST00000549267 280 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.89□□□□□ -1.79
LDB3O75112 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB3O75112 AC087883.1-201ENST00000551882 391 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AP005205.1-201ENST00000563503 508 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB3O75112 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB3O75112 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB3O75112 AC010680.4-201ENST00000605334 543 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AP003117.2-201ENST00000606010 545 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC106028.5-201ENST00000610332 395 ntBASIC3.89□□□□□ -1.79
LDB3O75112 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.89□□□□□ -1.79
LDB3O75112 FAM157B-203ENST00000639350 358 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC099063.3-201ENST00000642066 185 ntBASIC3.89□□□□□ -1.79
LDB3O75112 AC116667.1-201ENST00000604855 2072 ntBASIC3.89□□□□□ -1.79
LDB3O75112 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 OR5BR1P-201ENST00000524992 1330 ntBASIC3.89□□□□□ -1.79
LDB3O75112 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB3O75112 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDB3O75112 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
LDB3O75112 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 RNU1-85P-201ENST00000364127 164 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RNU6-374P-201ENST00000364146 108 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RNU11-4P-201ENST00000391149 133 ntBASIC3.88□□□□□ -1.79
LDB3O75112 CYCSP45-201ENST00000402289 315 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AL450338.1-201ENST00000407987 512 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RNU2-28P-201ENST00000410457 189 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RN7SKP33-201ENST00000410942 340 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RPS15AP40-201ENST00000419621 391 ntBASIC3.88□□□□□ -1.79
LDB3O75112 SDCBPP2-201ENST00000424643 885 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AC010975.2-201ENST00000427781 588 ntBASIC3.88□□□□□ -1.79
LDB3O75112 VDAC1P6-201ENST00000430062 855 ntBASIC3.88□□□□□ -1.79
LDB3O75112 MED14P1-201ENST00000430517 648 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms