Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RPS27AP9-201ENST00000477681 438 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 AC126121.1-201ENST00000482313 553 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
SHOX2O60902 SNORA31.13-201ENST00000516624 135 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOX2O60902 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.08□□□□□ -1.92
SHOX2O60902 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.08□□□□□ -1.92
SHOX2O60902 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.08□□□□□ -1.92
SHOX2O60902 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOX2O60902 AC034105.3-201ENST00000565294 442 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOX2O60902 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.08□□□□□ -1.92
SHOX2O60902 AC245128.3-201ENST00000594721 748 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 AC136601.2-201ENST00000604356 474 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
SHOX2O60902 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHOX2O60902 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
SHOX2O60902 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SHOX2O60902 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHOX2O60902 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHOX2O60902 AC073325.2-201ENST00000339545 159 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 MIR183-201ENST00000384958 110 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 MIR1250-201ENST00000408098 113 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.07□□□□□ -1.92
SHOX2O60902 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC073063.1-201ENST00000434352 607 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.07□□□□□ -1.92
SHOX2O60902 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.07□□□□□ -1.92
SHOX2O60902 AL513343.1-201ENST00000451818 792 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.07□□□□□ -1.92
SHOX2O60902 VN1R17P-201ENST00000472048 1090 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.07□□□□□ -1.92
SHOX2O60902 RNU6-826P-201ENST00000516827 104 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.07□□□□□ -1.92
SHOX2O60902 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHOX2O60902 AC103843.2-201ENST00000530523 682 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AP003717.3-201ENST00000544832 1180 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 SYF2P1-201ENST00000550658 413 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.07□□□□□ -1.92
SHOX2O60902 AL031985.2-201ENST00000600955 480 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AP000787.2-201ENST00000604432 568 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AL162713.1-201ENST00000604480 262 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AC006023.2-201ENST00000609916 167 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AC002076.2-201ENST00000617362 122 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AC009032.1-201ENST00000617574 431 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.07□□□□□ -1.92
SHOX2O60902 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
SHOX2O60902 AC110774.1-201ENST00000623567 2018 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 AL365440.1-201ENST00000436135 2167 ntBASIC3.07□□□□□ -1.92
SHOX2O60902 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHOX2O60902 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHOX2O60902 SNORA27.3-201ENST00000364937 134 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHOX2O60902 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHOX2O60902 MIR142-201ENST00000384835 87 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.06□□□□□ -1.92
SHOX2O60902 MIR1303-201ENST00000408625 86 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.06□□□□□ -1.92
SHOX2O60902 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.06□□□□□ -1.92
SHOX2O60902 AC023128.2-201ENST00000420880 1223 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 RPL7P46-201ENST00000425129 740 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC091286.1-201ENST00000431233 461 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 UBE2V2P3-201ENST00000433562 437 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHOX2O60902 RPL26P28-201ENST00000451325 435 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 RBMY2UP-201ENST00000453474 324 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.06□□□□□ -1.92
SHOX2O60902 HMGN2P16-201ENST00000456802 261 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.06□□□□□ -1.92
SHOX2O60902 OR52A4P-203ENST00000498233 1014 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 WBP1LP4-201ENST00000505043 344 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SHOX2O60902 RNU1-95P-201ENST00000516357 160 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 RN7SKP244-201ENST00000516513 307 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 RNU1-128P-201ENST00000516704 160 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.06□□□□□ -1.92
SHOX2O60902 HMGB1P41-201ENST00000520234 440 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC104115.2-201ENST00000523026 687 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC004486.1-201ENST00000546846 233 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC107016.2-201ENST00000547968 190 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC010198.2-201ENST00000550612 259 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.06□□□□□ -1.92
SHOX2O60902 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.06□□□□□ -1.92
SHOX2O60902 AC090312.2-201ENST00000582687 378 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 AC079610.2-201ENST00000604818 690 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHOX2O60902 AC011374.2-201ENST00000607135 526 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SHOX2O60902 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHOX2O60902 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.06□□□□□ -1.92
SHOX2O60902 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHOX2O60902 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHOX2O60902 PABPC1P7-201ENST00000413177 1513 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms