Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.21□□□□□ -1.74
ATP2A1O14983 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATP2A1O14983 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATP2A1O14983 MTND5P28-201ENST00000438005 1594 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATP2A1O14983 SAGE4P-201ENST00000442271 3381 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ATP2A1O14983 AC007685.1-201ENST00000329806 452 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 FAM133CP-201ENST00000332869 704 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 RNA5SP502-201ENST00000362694 119 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATP2A1O14983 RNU2-42P-201ENST00000410697 113 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.2□□□□□ -1.74
ATP2A1O14983 RPL36P19-201ENST00000430744 301 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.2□□□□□ -1.74
ATP2A1O14983 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.2□□□□□ -1.74
ATP2A1O14983 NECAP1P2-201ENST00000455668 727 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 snoU13.7-201ENST00000459220 104 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
ATP2A1O14983 AL358832.1-201ENST00000497800 389 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 HMGB1P21-201ENST00000502313 581 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 OR5H4P-201ENST00000510851 923 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC074250.1-201ENST00000511117 192 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 RN7SKP31-201ENST00000516354 278 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 SNORA48.10-201ENST00000516965 160 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.2□□□□□ -1.74
ATP2A1O14983 AC027309.2-201ENST00000520566 192 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 DUXAP5-201ENST00000529668 529 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.2□□□□□ -1.74
ATP2A1O14983 AC087465.1-201ENST00000560574 245 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AL132657.2-201ENST00000564417 358 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AL360157.1-201ENST00000565962 87 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATP2A1O14983 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.2□□□□□ -1.74
ATP2A1O14983 CLIC4P2-201ENST00000601934 717 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 ELOCP35-201ENST00000604289 336 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC115621.1-201ENST00000604653 858 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AL163642.2-201ENST00000604722 1019 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC080013.3-201ENST00000606839 578 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC005332.6-201ENST00000613178 446 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 AC231759.1-201ENST00000616455 597 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.2□□□□□ -1.74
ATP2A1O14983 AC011978.2-201ENST00000569835 2054 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATP2A1O14983 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.2□□□□□ -1.74
ATP2A1O14983 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATP2A1O14983 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
ATP2A1O14983 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATP2A1O14983 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATP2A1O14983 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AC073346.2-201ENST00000624724 2058 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 RNU6-921P-201ENST00000384361 107 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 MTCO3P1-205ENST00000422088 832 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC097713.2-201ENST00000430199 356 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC005345.1-201ENST00000431868 217 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 CETN4P-201ENST00000432407 469 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 EXTL2P1-201ENST00000446218 416 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AL133477.1-201ENST00000457472 514 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AC004263.1-201ENST00000479327 332 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AC079395.1-201ENST00000510981 262 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC116353.3-201ENST00000511215 249 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC109445.1-201ENST00000512356 383 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 MTCO1P30-201ENST00000515244 580 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC007458.1-201ENST00000542812 373 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 MTCYBP28-201ENST00000566728 1132 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC138915.2-201ENST00000569776 97 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 AP001180.3-201ENST00000582221 145 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.19□□□□□ -1.74
ATP2A1O14983 NIFKP6-201ENST00000598115 845 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 MIR7851-201ENST00000610611 160 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AC069209.1-201ENST00000619282 651 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 AL359715.5-201ENST00000623431 443 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 MIR4278-201ENST00000636094 69 ntBASIC4.19□□□□□ -1.74
ATP2A1O14983 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATP2A1O14983 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.19□□□□□ -1.74
ATP2A1O14983 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATP2A1O14983 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.19□□□□□ -1.74
ATP2A1O14983 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATP2A1O14983 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATP2A1O14983 AL356274.2-201ENST00000624379 3752 ntBASIC4.18□□□□□ -1.74
ATP2A1O14983 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.18□□□□□ -1.74
ATP2A1O14983 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.18□□□□□ -1.74
ATP2A1O14983 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATP2A1O14983 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATP2A1O14983 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATP2A1O14983 XIAPP3-201ENST00000312918 795 ntBASIC4.18□□□□□ -1.74
ATP2A1O14983 SNORD113-6-201ENST00000363345 75 ntBASIC4.18□□□□□ -1.74
ATP2A1O14983 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.18□□□□□ -1.74
ATP2A1O14983 RNU6-441P-201ENST00000384545 106 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms