Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.76□□□□□ -1.97
UBFD1O14562 AL133271.1-201ENST00000538229 291 ntBASIC2.76□□□□□ -1.97
UBFD1O14562 AL163153.1-201ENST00000554223 283 ntBASIC2.76□□□□□ -1.97
UBFD1O14562 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.76□□□□□ -1.97
UBFD1O14562 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.76□□□□□ -1.97
UBFD1O14562 MIR548Y-201ENST00000582739 110 ntBASIC2.76□□□□□ -1.97
UBFD1O14562 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.76□□□□□ -1.97
UBFD1O14562 AC113194.1-201ENST00000606037 500 ntBASIC2.76□□□□□ -1.97
UBFD1O14562 AC011472.4-201ENST00000615848 491 ntBASIC2.76□□□□□ -1.97
UBFD1O14562 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
UBFD1O14562 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
UBFD1O14562 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.75□□□□□ -1.97
UBFD1O14562 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UBFD1O14562 RNU6-185P-201ENST00000384421 107 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 CCNB2P1-201ENST00000399411 1150 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 AL355379.1-201ENST00000405542 640 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UBFD1O14562 AC004987.3-201ENST00000413879 771 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.75□□□□□ -1.97
UBFD1O14562 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 YWHAZP7-201ENST00000436906 631 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.75□□□□□ -1.97
UBFD1O14562 AC112653.1-201ENST00000443851 386 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 RPL29P29-201ENST00000448725 423 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 RPL37P6-202ENST00000464216 403 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 S100A11P2-201ENST00000467589 312 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 RN7SL297P-201ENST00000483161 293 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 AC096576.1-201ENST00000489014 359 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 RN7SKP282-201ENST00000516824 299 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UBFD1O14562 AP002404.1-201ENST00000532005 451 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.75□□□□□ -1.97
UBFD1O14562 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.75□□□□□ -1.97
UBFD1O14562 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.75□□□□□ -1.97
UBFD1O14562 FRG1DP-201ENST00000635586 771 ntBASIC2.75□□□□□ -1.97
UBFD1O14562 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
UBFD1O14562 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UBFD1O14562 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.75□□□□□ -1.97
UBFD1O14562 AC004944.1-201ENST00000517807 3059 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 HMGB1P10-201ENST00000395823 563 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UBFD1O14562 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.74□□□□□ -1.97
UBFD1O14562 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.74□□□□□ -1.97
UBFD1O14562 RPL31P45-201ENST00000419532 356 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 MUPP-201ENST00000438111 566 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.74□□□□□ -1.97
UBFD1O14562 TRIM60P18-201ENST00000441518 828 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UBFD1O14562 HMGB1P5-202ENST00000451497 985 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC104308.1-201ENST00000454621 333 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC011825.1-201ENST00000484967 388 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC091826.1-201ENST00000514065 313 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC104997.1-201ENST00000519761 717 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 OR4V1P-201ENST00000525394 1140 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.74□□□□□ -1.97
UBFD1O14562 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.74□□□□□ -1.97
UBFD1O14562 AC027807.1-201ENST00000559921 996 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC009268.1-201ENST00000561352 1203 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 MTND4LP24-201ENST00000572277 291 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
UBFD1O14562 AC023043.3-201ENST00000593113 385 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.74□□□□□ -1.97
UBFD1O14562 AC006539.2-201ENST00000601729 572 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.74□□□□□ -1.97
UBFD1O14562 MTCO3P22-201ENST00000603219 784 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC090425.2-201ENST00000608818 501 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 MIR7973-1-201ENST00000614683 76 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AC007998.5-201ENST00000622938 237 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.74□□□□□ -1.97
UBFD1O14562 AL137790.1-201ENST00000634283 177 ntBASIC2.74□□□□□ -1.97
UBFD1O14562 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBFD1O14562 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.74□□□□□ -1.97
UBFD1O14562 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBFD1O14562 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.73□□□□□ -1.97
UBFD1O14562 RNU4-23P-201ENST00000362839 140 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
UBFD1O14562 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.73□□□□□ -1.97
UBFD1O14562 AC008065.1-201ENST00000428525 348 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.73□□□□□ -1.97
UBFD1O14562 SETP8-201ENST00000435341 628 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AL590399.6-201ENST00000446396 307 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 HMGN2P21-201ENST00000447764 270 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 NIPA2P5-201ENST00000452282 464 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 GSTA11P-201ENST00000452866 669 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 RPL23AP11-201ENST00000475260 469 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 FABP5P6-201ENST00000510588 409 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC005921.1-201ENST00000510589 286 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.73□□□□□ -1.97
UBFD1O14562 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.73□□□□□ -1.97
UBFD1O14562 RNU6-491P-201ENST00000516099 110 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
UBFD1O14562 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.73□□□□□ -1.97
UBFD1O14562 HPRT1P3-201ENST00000539521 576 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.73□□□□□ -1.97
UBFD1O14562 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms