Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 HMGB1P18-201ENST00000438801 619 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 NUTF2P3-201ENST00000448540 384 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 BX276092.8-201ENST00000455722 250 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 snoU13.22-201ENST00000459428 104 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC027575.1-201ENST00000481064 460 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC104687.1-201ENST00000485829 412 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 RPS27P23-201ENST00000487608 251 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.17□□□□□ -1.58
RFXAPO00287 AC098799.3-201ENST00000506095 438 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 POU5F1P7-201ENST00000508759 541 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC005741.1-201ENST00000511094 432 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 Y_RNA.691-201ENST00000516611 103 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 IGHV3-63-201ENST00000518422 341 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.17□□□□□ -1.58
RFXAPO00287 AP001781.1-201ENST00000530977 207 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.17□□□□□ -1.58
RFXAPO00287 AC087241.2-201ENST00000535801 324 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.17□□□□□ -1.58
RFXAPO00287 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.17□□□□□ -1.58
RFXAPO00287 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.17□□□□□ -1.58
RFXAPO00287 AC006270.2-201ENST00000578523 652 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC093227.2-201ENST00000589357 285 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RFXAPO00287 AL669831.4-202ENST00000590817 238 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 AC090948.1-201ENST00000607464 549 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AL161734.1-201ENST00000609720 557 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AC114781.5-201ENST00000615297 108 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 AL078596.1-201ENST00000624856 447 ntBASIC5.17□□□□□ -1.58
RFXAPO00287 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.17□□□□□ -1.58
RFXAPO00287 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.17□□□□□ -1.58
RFXAPO00287 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFXAPO00287 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.16□□□□□ -1.58
RFXAPO00287 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.16□□□□□ -1.58
RFXAPO00287 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.16□□□□□ -1.58
RFXAPO00287 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RFXAPO00287 SMG1P7-201ENST00000565246 2704 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 MTND5P33-201ENST00000571250 1450 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 SNORA22B-201ENST00000383876 138 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 SNORD116-29-201ENST00000384516 83 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 RNU6-1158P-201ENST00000391167 107 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 AL121972.1-201ENST00000402023 252 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 RN7SKP140-201ENST00000411196 284 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 MTND3P8-201ENST00000412909 339 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 AL358176.3-201ENST00000420757 454 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 RPEP2-201ENST00000432149 701 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 UBE2V1P5-201ENST00000440070 405 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 RFPL4AP3-201ENST00000515267 345 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.16□□□□□ -1.58
RFXAPO00287 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.16□□□□□ -1.58
RFXAPO00287 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.16□□□□□ -1.58
RFXAPO00287 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.16□□□□□ -1.58
RFXAPO00287 AC104237.2-201ENST00000612456 443 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 AC015908.5-201ENST00000623289 343 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 CR381572.2-201ENST00000624852 397 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 AL133216.2-202ENST00000634512 349 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 MTND4LP32-201ENST00000636111 270 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 A2MP1-204ENST00000566278 4130 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.16□□□□□ -1.58
RFXAPO00287 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFXAPO00287 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFXAPO00287 RAD17P1-201ENST00000418130 2042 ntBASIC5.16□□□□□ -1.58
RFXAPO00287 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
RFXAPO00287 OR56B2P-202ENST00000641377 2453 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms