Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
DDX39AO00148 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX39AO00148 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX39AO00148 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX39AO00148 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX39AO00148 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
DDX39AO00148 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX39AO00148 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
DDX39AO00148 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX39AO00148 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 HMGB1P5-201ENST00000255320 642 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 RNU6-251P-201ENST00000363235 104 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 RNA5SP267-201ENST00000364893 126 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 RNU6-328P-201ENST00000390887 106 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 RPL7P27-201ENST00000403775 720 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AL024474.1-201ENST00000404655 591 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX39AO00148 AC027644.1-201ENST00000419595 298 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 RPL31P54-201ENST00000429803 370 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 AC241584.1-201ENST00000438469 1241 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 HMGB1P16-201ENST00000447155 540 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 RPL7P52-201ENST00000449200 742 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 PABPC1P3-201ENST00000469174 459 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AC098799.1-201ENST00000504752 800 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AC016550.1-201ENST00000505348 785 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX39AO00148 MTCO2P32-201ENST00000514865 403 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AP006245.1-201ENST00000522549 120 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX39AO00148 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX39AO00148 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.86□□□□□ -1.79
DDX39AO00148 AC044913.1-201ENST00000557200 430 ntBASIC3.86□□□□□ -1.79
DDX39AO00148 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX39AO00148 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX39AO00148 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX39AO00148 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX39AO00148 AL672296.1-201ENST00000427780 2158 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX39AO00148 SNORA40.4-201ENST00000390971 128 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 SNORA11.1-201ENST00000408133 129 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX39AO00148 RPF2P1-201ENST00000424137 906 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC005300.1-201ENST00000428401 373 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX39AO00148 BX510359.1-201ENST00000456973 237 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 RPS20P24-201ENST00000457473 361 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC093663.1-201ENST00000497190 394 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC108078.3-201ENST00000502633 489 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC084024.2-201ENST00000503480 791 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC093801.2-201ENST00000503966 1050 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX39AO00148 AC093767.1-201ENST00000504523 156 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX39AO00148 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX39AO00148 AP001317.1-201ENST00000531194 960 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 MTND5P21-201ENST00000531961 522 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.85□□□□□ -1.79
DDX39AO00148 AL121603.1-201ENST00000553815 142 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX39AO00148 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX39AO00148 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX39AO00148 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX39AO00148 BNIP3P38-201ENST00000601117 544 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AL162713.1-201ENST00000604480 262 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC099785.1-201ENST00000605697 437 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX39AO00148 AL359715.5-201ENST00000623431 443 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC026634.1-201ENST00000634369 198 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AC127502.3-201ENST00000636170 1206 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX39AO00148 CEP170P1-201ENST00000502249 4587 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 AL031985.3-201ENST00000565390 2449 ntBASIC3.85□□□□□ -1.79
DDX39AO00148 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX39AO00148 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX39AO00148 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX39AO00148 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX39AO00148 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX39AO00148 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX39AO00148 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX39AO00148 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
DDX39AO00148 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 Z99755.1-201ENST00000414048 380 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX39AO00148 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX39AO00148 AL590103.1-201ENST00000434488 307 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX39AO00148 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX39AO00148 AC005019.1-201ENST00000436455 431 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 ARF4P4-201ENST00000439608 520 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX39AO00148 MTCO1P48-201ENST00000448024 1096 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 HMGB1P15-201ENST00000453854 435 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX39AO00148 AL133477.1-201ENST00000457472 514 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms