Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC016065.2-201ENST00000514530 444 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC110760.3-202ENST00000515177 371 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL133457.1-201ENST00000564251 987 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC037471.2-201ENST00000564941 598 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 MTND3P13-201ENST00000574391 343 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR3200-201ENST00000580767 85 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC022069.1-201ENST00000582910 658 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC015688.2-201ENST00000584523 262 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR4760-201ENST00000585040 80 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 MTCO2P2-201ENST00000591258 225 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL035411.2-201ENST00000604022 421 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AP003973.1-201ENST00000604639 691 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL355578.1-201ENST00000607405 1328 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC106052.1-201ENST00000608029 497 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 MTND5P28-201ENST00000438005 1594 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC073073.2-201ENST00000609827 2578 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-1243P-201ENST00000364028 107 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 snoZ40.1-201ENST00000364540 72 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 SNORD116-12-201ENST00000384468 92 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 FCF1P2-201ENST00000415284 583 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC017079.2-201ENST00000416102 485 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 RPL21P109-201ENST00000422213 475 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 NANOGP5-201ENST00000424456 877 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC005300.1-201ENST00000428401 373 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC114973.1-201ENST00000429057 632 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 B3GNT2P1-201ENST00000434960 952 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC084357.1-201ENST00000473404 255 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC084024.2-201ENST00000503480 791 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 SNORA74D-201ENST00000516404 141 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 IGKV2-26-201ENST00000518305 343 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 IGKV2-23-201ENST00000518729 323 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 OR8K4P-201ENST00000534608 872 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AL132857.1-201ENST00000555180 708 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 MTCYBP28-201ENST00000566728 1132 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 VN1R83P-201ENST00000595685 445 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC010680.4-201ENST00000605334 543 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AP003117.2-201ENST00000606010 545 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC012531.5-201ENST00000611375 151 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC098679.5-201ENST00000624394 571 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 OR1S1-201ENST00000624470 978 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 FAM157B-203ENST00000639350 358 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 OR6C71P-202ENST00000641886 1107 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC02211-204ENST00000642024 1070 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AP005901.5-201ENST00000545779 1796 ntBASIC3.56□□□□□ -1.84
NEDD8-MDP1E9PL57 AC090229.1-201ENST00000590983 1609 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL133383.2-201ENST00000622958 2336 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 NMD3P1-201ENST00000439704 1488 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 HMGB1P5-201ENST00000255320 642 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RNA5SP42-201ENST00000364278 115 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-441P-201ENST00000384545 106 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-328P-201ENST00000390887 106 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 SNORD65.1-201ENST00000390889 71 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 BTBD10P2-201ENST00000404779 676 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL136310.1-201ENST00000404926 654 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RNA5SP120-201ENST00000410900 112 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms