Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.15□□□□□ -1.43
TMEM88BA6NKF7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 RNA5SP326-201ENST00000363209 110 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 Y_RNA.493-201ENST00000384422 102 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 SNORA37-201ENST00000384504 129 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 MIR134-201ENST00000385258 73 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 RNU6-754P-201ENST00000391166 107 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 RN7SKP114-201ENST00000410327 279 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 RPS17P17-201ENST00000419392 409 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AL391219.1-201ENST00000422570 483 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 MTATP6P16-201ENST00000434543 526 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AL121871.1-201ENST00000443413 436 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AL121877.1-201ENST00000453704 622 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 RPS27AP1-201ENST00000475545 471 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC058823.1-201ENST00000485315 474 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 TOMM22P4-201ENST00000511318 336 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 DEFB109D-201ENST00000529497 240 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AL022345.1-201ENST00000607292 135 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 MIR1302-1-201ENST00000637932 143 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 MTND4P35-201ENST00000604257 1375 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 AC022893.2-201ENST00000564832 3296 ntBASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEM88BA6NKF7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC011155.1-201ENST00000316512 456 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 RNU4-66P-201ENST00000365199 138 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AL359837.1-201ENST00000381357 287 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AL122016.1-201ENST00000403365 367 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 RNA5SP107-201ENST00000411358 122 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 SAR1AP4-201ENST00000429225 591 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 MRPL50P4-201ENST00000446432 475 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC010655.1-201ENST00000449336 292 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 RPS29P15-201ENST00000458329 171 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 HMGN2P26-201ENST00000463169 339 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 HIGD1AP3-201ENST00000515857 278 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 RN7SKP256-201ENST00000517201 314 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 PSMA3P-201ENST00000555485 635 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC127024.5-201ENST00000580085 462 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 RN7SL356P-201ENST00000582228 248 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC010928.3-201ENST00000587712 541 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC067852.4-201ENST00000590314 478 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC005498.1-201ENST00000592125 465 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AL356218.2-201ENST00000605264 187 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 GABPAP-201ENST00000419271 1356 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 SAMMSON-213ENST00000641336 1521 ntBASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms