Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 YPEL5P2-201ENST00000605553 359 ntBASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 AL162574.2-201ENST00000614618 657 ntBASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 AP000676.4-201ENST00000624659 623 ntBASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DRB4X5D2U9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AL591034.1-201ENST00000407447 340 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AL451074.5-201ENST00000415894 435 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 NUP35P2-201ENST00000416748 943 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 KRR1P1-201ENST00000419430 803 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 USP9YP36-201ENST00000424581 829 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AL512649.1-201ENST00000428997 581 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC104978.1-201ENST00000449387 391 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 BX510359.1-201ENST00000456973 237 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC104472.2-201ENST00000469035 601 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AL024509.2-201ENST00000493462 493 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 CAB39P1-201ENST00000502277 460 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 PRELID3BP6-201ENST00000503839 571 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 HIGD1AP3-201ENST00000515857 278 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC096947.1-201ENST00000603233 470 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC124312.4-201ENST00000605533 310 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC084036.1-201ENST00000609190 508 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC016252.1-201ENST00000609721 474 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AC090897.3-201ENST00000636973 1157 ntBASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HLA-DRB4X5D2U9 AL035425.3-201ENST00000564206 4996 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 SNORA71.1-201ENST00000364523 117 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 RNU6-167P-201ENST00000384292 106 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 RNU2-21P-201ENST00000410368 188 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 RN7SKP220-201ENST00000410611 288 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 ATG3P1-201ENST00000419507 911 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AJ239321.1-201ENST00000424255 564 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 RPL36AP6-201ENST00000435770 321 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 RPL27AP5-201ENST00000469428 449 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 MTND3P6-201ENST00000485242 339 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 OR5G4P-201ENST00000525251 760 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 PSMA2P1-201ENST00000526365 646 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC109635.4-202ENST00000531666 412 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 ELOCP31-201ENST00000540463 467 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC107016.2-201ENST00000547968 190 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 MIR3670-2-201ENST00000582974 65 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 MIR3670-1-201ENST00000584160 65 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 MIR3670-3-201ENST00000584855 65 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC083760.1-201ENST00000589621 670 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 BNIP3P33-201ENST00000598912 569 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC006539.2-201ENST00000601729 572 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 DUXAP4-201ENST00000603046 613 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC007179.3-201ENST00000604976 235 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC096577.2-201ENST00000611455 153 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 MIR3670-4-201ENST00000612260 65 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC011472.4-201ENST00000615848 491 ntBASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DRB4X5D2U9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 AL161431.1-201ENST00000618966 4205 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 RNU6-50P-201ENST00000362356 103 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 SNORA54-201ENST00000384281 123 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 MTND4P13-201ENST00000402078 1023 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 AC233728.2-201ENST00000425348 757 ntBASIC2.22□□□□□ -2.05
HLA-DRB4X5D2U9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms