Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RPL12P26-201ENST00000452430 487 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC112198.1-201ENST00000505369 1220 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC090071.1-201ENST00000507713 644 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 UBE2NP1-201ENST00000545592 458 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 CYCSP30-201ENST00000546447 172 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC074029.1-201ENST00000552531 1044 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 ISCA1P3-201ENST00000577104 373 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 OR4K7P-201ENST00000580232 945 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC107982.3-201ENST00000584957 985 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 VN1R79P-201ENST00000593540 513 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AL451086.1-201ENST00000605596 223 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RNA5SP108-201ENST00000605921 117 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC139792.2-201ENST00000624218 587 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 HSPA8P1-201ENST00000425843 1833 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.15□□□□□ -1.74
SNX9Q9Y5X1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RNU5D-1-201ENST00000363299 116 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RNA5SP322-201ENST00000363617 119 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 MIR153-1-201ENST00000384914 90 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 MIR134-201ENST00000385258 73 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 SNORA3.3-201ENST00000408712 125 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RN7SKP202-201ENST00000410439 330 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 CYCSP19-201ENST00000411715 316 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 JKAMPP1-201ENST00000413804 919 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 BOLA3P4-201ENST00000418151 400 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 CDC27P1-201ENST00000445384 715 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RSL24D1P3-201ENST00000449255 495 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 HMGB3P22-202ENST00000451823 572 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RPS20P21-201ENST00000466859 343 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 BZW1P2-201ENST00000473537 826 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RPL7P24-201ENST00000493052 752 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC068305.1-201ENST00000497406 726 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 SNX5P1-201ENST00000505757 1041 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 XKRY-201ENST00000510392 1100 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 Vault.1-201ENST00000516474 102 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RN7SKP234-201ENST00000517173 224 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 MTCO1P49-201ENST00000523429 802 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 TRAV15-201ENST00000556680 249 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC022069.1-201ENST00000582910 658 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AL390838.2-201ENST00000602394 274 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC010738.1-201ENST00000604970 987 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC122133.1-201ENST00000613964 233 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 C2orf27A-204ENST00000623058 969 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AC091965.5-201ENST00000624785 342 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms