Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB1Q9Y5F3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PCDHB1Q9Y5F3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB1Q9Y5F3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB1Q9Y5F3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC012020.1-201ENST00000624541 1728 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AL442639.1-201ENST00000625030 1899 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC139713.2-215ENST00000641428 5037 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 SNORA70F-201ENST00000384142 135 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AL359643.1-201ENST00000404109 423 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC004975.1-201ENST00000428733 208 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC127537.2-201ENST00000439258 465 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 DNAJC19P4-201ENST00000440115 345 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 MTND6P13-201ENST00000443510 523 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 NUTF2P7-201ENST00000453086 375 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 RN7SL41P-201ENST00000476144 297 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 SCARNA22-201ENST00000503991 125 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC091868.1-201ENST00000508746 304 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 SNORA18.6-201ENST00000516792 115 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 DEFB108A-201ENST00000530110 222 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC006960.3-201ENST00000561845 705 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 OR4G1P-201ENST00000588632 938 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 BNIP3P30-201ENST00000601184 574 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AC025588.3-201ENST00000604182 274 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 U4.5-201ENST00000617137 123 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 OR5AK4P-201ENST00000635912 903 ntBASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB1Q9Y5F3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 ZNF734P-201ENST00000419494 1534 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 FRG1BP-201ENST00000278882 761 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-853P-201ENST00000364306 107 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MTND4LP20-201ENST00000402379 270 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL356421.1-201ENST00000403255 413 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL080315.1-201ENST00000406055 466 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 FCF1P10-201ENST00000407590 479 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MIR1193-201ENST00000408109 78 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL591848.1-201ENST00000413092 322 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 C1DP2-201ENST00000418167 426 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL592293.2-201ENST00000422292 996 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 FABP7P1-201ENST00000424004 391 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC007742.1-201ENST00000425789 329 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL138785.1-201ENST00000425821 331 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 ISCA1P1-201ENST00000426679 387 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL732292.1-201ENST00000426692 226 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 RPL34P6-201ENST00000432390 345 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 ELOCP26-201ENST00000436067 329 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL445433.1-201ENST00000457507 257 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms