Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 MTCYBP12-201ENST00000440559 1134 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AP000873.1-201ENST00000463987 400 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 RPL9P32-201ENST00000464118 620 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC006483.1-201ENST00000487308 313 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC009097.3-201ENST00000563557 1018 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AL390838.2-201ENST00000602394 274 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AP004607.9-201ENST00000618202 316 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC110774.1-201ENST00000623567 2018 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 RNU6-1251P-201ENST00000364502 107 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 PTGES3P5-201ENST00000455109 434 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 MTATP6P22-201ENST00000507369 598 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC111000.2-201ENST00000507775 550 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC010653.1-201ENST00000571108 881 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC005951.1-201ENST00000576706 485 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC024023.1-201ENST00000624530 922 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC108206.1-201ENST00000570186 4159 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 RNA5SP295-201ENST00000362655 121 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 HMGB1P13-201ENST00000406019 642 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC092832.1-201ENST00000422934 400 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AP000936.2-201ENST00000447151 681 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 MTCYBP14-201ENST00000457471 715 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC091179.1-201ENST00000461606 579 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC117522.3-201ENST00000507974 584 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 RN7SKP282-201ENST00000516824 299 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AL161713.1-201ENST00000555538 145 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AL590410.1-201ENST00000617925 333 ntBASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC88CQ9P219 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AC034244.2-201ENST00000514668 858 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 OR8L1P-201ENST00000534005 955 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AL512310.1-201ENST00000548639 172 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AL359535.1-201ENST00000612100 1087 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AC009039.2-201ENST00000624524 529 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 AC123912.3-201ENST00000600907 1367 ntBASIC2.59□□□□□ -1.99
CCDC88CQ9P219 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC88CQ9P219 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 SDCBPP3-201ENST00000419629 891 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AC126121.1-201ENST00000482313 553 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AP001025.2-201ENST00000490908 477 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 RN7SKP272-201ENST00000516988 232 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AC103783.1-201ENST00000520506 373 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AL049874.4-201ENST00000557593 255 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AL157394.1-201ENST00000562983 1224 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AC138761.3-201ENST00000579993 334 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AC107871.2-201ENST00000612894 502 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AL354950.1-201ENST00000614150 568 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 AL589935.2-201ENST00000616471 1231 ntBASIC2.59□□□□□ -2
CCDC88CQ9P219 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.59□□□□□ -2
CCDC88CQ9P219 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC88CQ9P219 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.58□□□□□ -2
CCDC88CQ9P219 GSTA12P-201ENST00000402398 508 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 RPL31P52-201ENST00000407532 367 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 RNA5SP129-201ENST00000410276 118 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.58□□□□□ -2
CCDC88CQ9P219 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AC073508.1-201ENST00000428866 656 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms