Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 RPS12P2-201ENST00000439728 269 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AC008280.2-201ENST00000455473 307 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 RPL21P18-201ENST00000469899 480 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 RPS27AP9-201ENST00000477681 438 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 YWHAZP1-201ENST00000556286 722 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AC092184.1-201ENST00000625042 715 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 AC011037.1-201ENST00000483964 558 ntBASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 AC108471.1-201ENST00000513977 287 ntBASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 OR4A45P-201ENST00000529954 901 ntBASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 AC004696.1-201ENST00000614345 607 ntBASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 AC074140.1-201ENST00000621617 208 ntBASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 AC090229.1-201ENST00000590983 1609 ntBASIC3.36□□□□□ -1.87
PHRF1Q9P1Y6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 ZNF72P-201ENST00000425869 1908 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 RNU6-76P-201ENST00000384060 104 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 ISCA1P6-201ENST00000427740 390 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 FAM172BP-201ENST00000487497 1089 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AC007423.1-201ENST00000605009 627 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AC010680.4-201ENST00000605334 543 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 AC004825.2-201ENST00000616634 455 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 FRG1DP-201ENST00000635586 771 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 OR4G1P-202ENST00000641173 1788 ntBASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.35□□□□□ -1.87
PHRF1Q9P1Y6 XPOTP1-201ENST00000443317 2398 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 SSR1P1-201ENST00000407630 814 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 AL353705.4-201ENST00000449661 238 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 AC092436.1-201ENST00000506450 503 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 AC010928.3-201ENST00000587712 541 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 AP001005.3-201ENST00000622049 129 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PHRF1Q9P1Y6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.88
PHRF1Q9P1Y6 Y_RNA.4-201ENST00000362333 112 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC069218.2-201ENST00000411665 344 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 POU5F1P7-201ENST00000508759 541 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC009063.1-201ENST00000563342 702 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 MIR5092-201ENST00000583139 88 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AL162233.1-201ENST00000620014 944 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 PISRT1-201ENST00000626175 531 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 RPS20P25-201ENST00000412447 352 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC096638.1-201ENST00000444678 216 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC092045.1-201ENST00000495716 1231 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AL845331.3-202ENST00000562856 261 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 U4.3-201ENST00000621047 82 ntBASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHRF1Q9P1Y6 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 SNORD114-1-201ENST00000362705 72 ntBASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 DPH3P2-201ENST00000422618 250 ntBASIC3.32□□□□□ -1.88
PHRF1Q9P1Y6 BTG3P1-201ENST00000435859 716 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms