Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-792P-201ENST00000363490 107 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SNORA62.3-201ENST00000365110 153 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SNORA5A-201ENST00000384111 134 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AL354719.1-201ENST00000406535 843 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 RPS20P25-201ENST00000412447 352 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AL158050.1-201ENST00000416077 457 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 RPL36AP36-201ENST00000418616 301 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SDCBPP3-201ENST00000419629 891 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC012065.2-201ENST00000421295 375 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC018644.1-201ENST00000429934 551 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 GOT2P5-201ENST00000433995 546 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC005002.1-201ENST00000447458 540 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AL133547.1-201ENST00000448546 220 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 OR5H3P-201ENST00000502817 919 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC010468.3-201ENST00000508225 458 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC104619.4-201ENST00000510773 249 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-362P-201ENST00000516736 90 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AP000916.1-201ENST00000533869 835 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC020914.6-201ENST00000594327 272 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 ZNF92P2-201ENST00000600543 1059 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AL020997.3-201ENST00000602843 359 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC245100.7-201ENST00000609678 442 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 U4.6-201ENST00000621618 127 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC098679.5-201ENST00000624394 571 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 AC103988.1-201ENST00000566382 2177 ntBASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CCNB1IP1Q9NPC3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 FRG1CP-201ENST00000358464 769 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU1-101P-201ENST00000391171 127 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 SAR1AP2-201ENST00000392696 594 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 MTND4LP20-201ENST00000402379 270 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 MTND3P20-201ENST00000407663 186 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU4-65P-201ENST00000410473 140 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU4-27P-201ENST00000410889 139 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 OR51A3P-201ENST00000413596 924 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 BMS1P22-201ENST00000414726 313 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 YPEL5P1-201ENST00000419731 367 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 HSPE1P28-201ENST00000443139 211 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 snoU13.4-201ENST00000458916 104 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 ST13P14-201ENST00000474095 734 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 SETP12-201ENST00000514068 805 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms