Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 FAM91A3P-201ENST00000456826 2544 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC046144.1-201ENST00000478559 1853 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC010329.2-201ENST00000595195 2737 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 ZNF962P-201ENST00000443465 3140 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 HMGB1P5-201ENST00000255320 642 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 OR4G2P-201ENST00000328113 903 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SNORA62.3-201ENST00000365110 153 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SNORD65.1-201ENST00000390889 71 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SNORD66.1-201ENST00000391230 76 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 MIR1303-201ENST00000408625 86 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 RNA5SP80-201ENST00000410475 111 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 UBTFL3-201ENST00000418934 1024 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC114814.2-201ENST00000419195 485 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 OR8F1P-201ENST00000425243 930 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 RPL21P110-201ENST00000433345 446 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 RFC5P1-201ENST00000454419 874 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SNRPGP9-201ENST00000456025 225 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 UBTFL6-201ENST00000477929 1024 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC146944.2-203ENST00000502493 354 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 BNIP3P41-201ENST00000503774 571 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC109445.1-201ENST00000512356 383 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 NPM1P41-201ENST00000512920 831 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC139495.1-202ENST00000513164 354 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 RNU6-678P-201ENST00000516832 109 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC090281.1-201ENST00000523019 276 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC005832.3-201ENST00000537929 631 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC074029.1-201ENST00000552531 1044 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 TPRKBP2-201ENST00000565969 475 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC022655.2-201ENST00000577280 318 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC022884.3-201ENST00000579571 248 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC012417.1-201ENST00000582307 1039 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 MIR3158-1-201ENST00000583596 81 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC103881.1-201ENST00000603476 538 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC009220.3-201ENST00000604318 586 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AL592221.1-201ENST00000605266 382 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC091965.4-201ENST00000607691 587 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC004067.1-201ENST00000608733 700 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SEPT14P19-203ENST00000633205 211 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC018555.1-201ENST00000567548 1980 ntBASIC4.32□□□□□ -1.72
EBF3Q9H4W6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
EBF3Q9H4W6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC005539.1-201ENST00000443768 1479 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 RNU6-619P-201ENST00000365146 108 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC019155.1-201ENST00000382242 574 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 Y_RNA.408-201ENST00000383987 102 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AL078604.1-201ENST00000404609 466 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AL590290.1-201ENST00000405336 380 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 Z99497.1-201ENST00000421282 135 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 MRPS36P1-201ENST00000421291 307 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 LARP1BP3-201ENST00000437229 869 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 MTND1P30-201ENST00000441241 901 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms