Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC01109-201ENST00000603837 3081 ntBASIC4.93□□□□□ -1.62
VPS11Q9H270 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS11Q9H270 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS11Q9H270 ZNF37BP-203ENST00000452306 1352 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 ZNF33CP-201ENST00000432492 2030 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
VPS11Q9H270 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 U3.2-201ENST00000362981 210 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 Y_RNA.86-201ENST00000363020 111 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 RNU6-254P-201ENST00000363377 107 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 Y_RNA.216-201ENST00000364205 93 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 RNU5E-5P-201ENST00000365379 116 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 SNORA17A-201ENST00000391185 133 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 ENSAP1-201ENST00000392855 326 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 RPS3AP36-201ENST00000398190 775 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AL356432.1-201ENST00000405809 419 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 DUTP5-201ENST00000406790 469 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 RAB28P1-201ENST00000411517 641 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 HMGB3P20-201ENST00000417997 600 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AL389915.1-201ENST00000422463 466 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC018644.1-201ENST00000429934 551 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC108059.2-201ENST00000434626 151 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 MTND3P2-201ENST00000438452 342 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 BX276092.4-201ENST00000452056 248 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC233279.1-201ENST00000455300 423 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC108693.1-201ENST00000496068 432 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 NDUFB4P2-201ENST00000509515 391 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS11Q9H270 RNA5SP360-201ENST00000516555 118 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 RN7SKP277-201ENST00000516895 283 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 TRMT10BP1-201ENST00000519377 943 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC022882.1-201ENST00000532142 501 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AP001004.1-201ENST00000582468 324 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AL049794.2-201ENST00000616301 365 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 AL158196.1-201ENST00000616786 434 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS11Q9H270 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 SNORA17.5-201ENST00000630429 132 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS11Q9H270 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS11Q9H270 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 AC066616.2-201ENST00000559334 1481 ntBASIC4.92□□□□□ -1.62
VPS11Q9H270 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS11Q9H270 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS11Q9H270 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS11Q9H270 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
VPS11Q9H270 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS11Q9H270 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS11Q9H270 OR14L1P-202ENST00000641545 3009 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 RNA5SP183-201ENST00000362452 119 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 SNORA17.1-201ENST00000362945 126 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 RNA5SP132-201ENST00000364725 118 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS11Q9H270 RNU6-657P-201ENST00000383904 107 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 AC092642.1-201ENST00000392417 425 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 GLULP6-201ENST00000399502 913 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 AL589647.1-201ENST00000402485 466 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 AL450338.1-201ENST00000407987 512 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS11Q9H270 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS11Q9H270 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS11Q9H270 AL356583.2-201ENST00000426536 280 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 AL358934.1-201ENST00000432346 324 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS11Q9H270 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 IPO7P1-201ENST00000442031 636 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 PPIAP20-201ENST00000449839 135 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS11Q9H270 RPL37P6-202ENST00000464216 403 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS11Q9H270 HMGN2P25-201ENST00000486956 268 ntBASIC4.91□□□□□ -1.62
VPS11Q9H270 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms