Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 PPIAP3-201ENST00000450588 505 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 PNPLA4P1-201ENST00000458328 305 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC108734.3-201ENST00000481241 1165 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC013828.1-201ENST00000481845 158 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC134050.1-201ENST00000495088 933 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 RNU1-95P-201ENST00000516357 160 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 RNU1-128P-201ENST00000516704 160 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC087808.1-201ENST00000520501 361 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 PDCL2P2-201ENST00000533651 189 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC092470.1-201ENST00000546187 132 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 TRAV15-201ENST00000556680 249 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 OR4G1P-201ENST00000588632 938 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC106052.1-201ENST00000608029 497 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC024257.5-201ENST00000612739 531 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 CR392039.5-201ENST00000623201 510 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC026634.1-201ENST00000634369 198 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 AC099786.3-201ENST00000565735 1410 ntBASIC3.61□□□□□ -1.83
CCM2Q9BSQ5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 CR381670.1-201ENST00000624291 1693 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RNU6-413P-201ENST00000384115 107 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 SNORD3H-201ENST00000384486 214 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RNU6-906P-201ENST00000384700 70 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC007066.1-201ENST00000392902 381 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RAB9AP3-201ENST00000412737 573 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RPL21P109-201ENST00000422213 475 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RAB9AP1-201ENST00000449393 573 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 MTCO3P20-201ENST00000454926 688 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 MTCO3P2-201ENST00000457365 171 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 SNORD105B-201ENST00000458770 79 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC090502.2-201ENST00000549267 280 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC138915.2-201ENST00000569776 97 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC069545.1-201ENST00000605671 358 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC009974.1-201ENST00000608881 455 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC121761.2-201ENST00000617300 689 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC006065.5-201ENST00000623427 349 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC068787.1-201ENST00000623908 691 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 AC048347.1-201ENST00000624621 427 ntBASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2Q9BSQ5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RNA5SP51-201ENST00000364750 119 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 SUGT1P1-201ENST00000379514 476 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 MIR200C-201ENST00000384980 68 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 MIR1250-201ENST00000408098 113 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RNU2-28P-201ENST00000410457 189 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AL161449.1-201ENST00000414531 1199 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms