Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX2Q99626 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AL138799.3-201ENST00000438968 350 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX2Q99626 MTND2P8-201ENST00000450555 1025 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.19□□□□□ -1.9
CDX2Q99626 CFTRP1-201ENST00000456646 183 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AC092451.1-201ENST00000480211 153 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX2Q99626 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX2Q99626 NARSP2-201ENST00000518524 679 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AC026616.1-201ENST00000523157 525 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.19□□□□□ -1.9
CDX2Q99626 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX2Q99626 NOP56P3-201ENST00000549457 385 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 TRAV37-201ENST00000553906 342 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 CBX3P2-202ENST00000583365 535 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 KATNBL1P1-201ENST00000605192 748 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AL355802.4-201ENST00000607635 548 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDX2Q99626 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.19□□□□□ -1.9
CDX2Q99626 AC138649.5-201ENST00000637456 137 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX2Q99626 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX2Q99626 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.19□□□□□ -1.9
CDX2Q99626 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDX2Q99626 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDX2Q99626 SEPT7P7-201ENST00000420492 1301 ntBASIC3.19□□□□□ -1.9
CDX2Q99626 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX2Q99626 RNF6P1-201ENST00000444889 1784 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 RNA5SP99-201ENST00000364020 114 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 SNORD51.1-201ENST00000365405 77 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX2Q99626 RNU4-31P-201ENST00000384211 141 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDX2Q99626 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX2Q99626 IFNNP1-201ENST00000429219 553 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 RPS24P8-201ENST00000431490 402 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.18□□□□□ -1.9
CDX2Q99626 RPL31P13-201ENST00000484151 370 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDX2Q99626 AP001646.1-201ENST00000527936 915 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.18□□□□□ -1.9
CDX2Q99626 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.18□□□□□ -1.9
CDX2Q99626 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX2Q99626 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX2Q99626 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.18□□□□□ -1.9
CDX2Q99626 AC141257.3-201ENST00000572906 215 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 AC079089.3-201ENST00000603094 673 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 AC011374.2-201ENST00000607135 526 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX2Q99626 AC116563.2-201ENST00000624751 535 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 NCAPGP1-201ENST00000505112 1814 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 DCAF13P1-201ENST00000495256 1330 ntBASIC3.18□□□□□ -1.9
CDX2Q99626 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX2Q99626 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDX2Q99626 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX2Q99626 RNU6-452P-201ENST00000384406 107 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 HMGN2P8-201ENST00000391458 268 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 NPM1P10-201ENST00000398310 865 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 CYCSP45-201ENST00000402289 315 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 U3.42-201ENST00000408746 214 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AL592148.1-201ENST00000413568 445 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX2Q99626 RPL21P109-201ENST00000422213 475 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 CR848007.2-201ENST00000424918 787 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 MTND4LP14-201ENST00000429447 288 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX2Q99626 RPL34P26-201ENST00000445636 354 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 RPL7P12-201ENST00000446719 750 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AL513343.1-201ENST00000451818 792 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX2Q99626 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX2Q99626 HMGB3P30-201ENST00000457863 606 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 RNU7-170P-201ENST00000459303 61 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 RN7SL93P-201ENST00000463035 293 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AC133134.1-201ENST00000466800 359 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX2Q99626 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX2Q99626 MTCO1P30-201ENST00000515244 580 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 RNU6-362P-201ENST00000516736 90 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 MTND5P21-201ENST00000531961 522 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX2Q99626 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX2Q99626 AC006270.2-201ENST00000578523 652 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX2Q99626 AC004775.1-201ENST00000607389 753 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDX2Q99626 AL353743.4-201ENST00000422653 1547 ntBASIC3.17□□□□□ -1.9
CDX2Q99626 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX2Q99626 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX2Q99626 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX2Q99626 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX2Q99626 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDX2Q99626 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDX2Q99626 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms