Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIR613-201ENST00000385248 95 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 RNU2-2P-201ENST00000410396 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 USP9YP6-201ENST00000413550 854 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 Z82205.1-201ENST00000428456 297 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 USP9YP34-201ENST00000453983 808 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.15-201ENST00000611544 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.16-201ENST00000613119 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.12-201ENST00000613778 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.20-201ENST00000613956 192 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.9-201ENST00000615427 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.11-201ENST00000616345 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.2-201ENST00000616535 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.3-201ENST00000617785 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.19-201ENST00000618602 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 RNU2-1-201ENST00000618664 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.6-201ENST00000619225 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.5-201ENST00000619465 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U2.10-201ENST00000620268 191 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 NPM1P10-201ENST00000398310 865 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 MTCO3P20-201ENST00000454926 688 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 snoU13.31-201ENST00000607291 104 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 U7.8-201ENST00000619968 63 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 AC006111.3-201ENST00000622137 383 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 AC117529.2-201ENST00000512159 2068 ntBASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 RPL12P25-201ENST00000455592 494 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AL590639.1-201ENST00000456484 337 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC016687.1-201ENST00000482574 353 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC096725.1-201ENST00000514266 313 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC117522.2-201ENST00000510049 657 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 IGKV2D-23-201ENST00000518179 286 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 HPRT1P3-201ENST00000539521 576 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 GNAI2P1-201ENST00000541815 315 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC008083.2-201ENST00000546707 476 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC011611.5-201ENST00000552477 578 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AL022099.1-201ENST00000604551 712 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 U4.3-201ENST00000621047 82 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 NPM1P49-201ENST00000448027 714 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 AL162233.1-201ENST00000620014 944 ntBASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
CSMD1Q96PZ7 OR6C64P-201ENST00000419708 825 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AL354710.1-201ENST00000453641 246 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 RN7SL283P-201ENST00000489055 303 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC245291.1-201ENST00000419501 328 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 BTG3P1-201ENST00000435859 716 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 SNORA31.1-201ENST00000515993 133 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 SNORA31.5-201ENST00000516190 133 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC128687.1-201ENST00000605304 619 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 MUC2-202ENST00000613187 4845 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AL139276.1-201ENST00000311910 1001 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms