Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 RN7SL290P-201ENST00000578661 300 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC006116.10-201ENST00000591836 581 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC105254.2-201ENST00000603636 436 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC113139.1-201ENST00000605049 239 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AP005432.2-201ENST00000608162 586 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL161637.1-201ENST00000622380 412 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 C2orf27A-204ENST00000623058 969 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL356585.4-201ENST00000623078 1229 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC004158.1-201ENST00000564508 4319 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC107021.2-201ENST00000567714 2095 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC092376.2-201ENST00000622621 4116 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 MAPK10-338ENST00000641647 3362 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC114546.3-201ENST00000623582 1734 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 Y_RNA.184-201ENST00000363884 108 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-730P-201ENST00000383954 104 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 SNORD37.1-201ENST00000390968 65 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 HMGB1P17-201ENST00000403495 628 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 MIR548P-201ENST00000408336 84 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 TPMTP2-201ENST00000414372 726 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 NDUFB4P5-201ENST00000415445 361 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 DPPA2P2-201ENST00000418220 897 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 NCOR1P3-201ENST00000420479 303 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 RPL23AP30-201ENST00000432419 501 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 MTND6P18-201ENST00000439477 513 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AL353748.1-201ENST00000440753 474 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC112498.1-201ENST00000444401 332 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AL354714.3-201ENST00000447284 493 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC104651.2-201ENST00000447549 528 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 GAPDHP14-201ENST00000450472 937 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 HMGN3P1-201ENST00000453847 193 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 RPS27AP17-201ENST00000463344 455 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 RN7SL189P-201ENST00000468631 289 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 RN7SL814P-201ENST00000487715 300 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 OR7H2P-201ENST00000513483 306 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC026402.1-201ENST00000513642 170 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-1170P-201ENST00000515974 106 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 SNORA40.12-201ENST00000516329 111 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 SNORD60.2-201ENST00000516883 86 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 IGKV1-32-201ENST00000519290 311 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AL352979.3-201ENST00000553515 247 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 HSPE1P14-201ENST00000605812 302 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 MIR7703-201ENST00000620784 77 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AC134503.1-201ENST00000633048 54 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 MTND4P35-201ENST00000604257 1375 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 AL049780.3-201ENST00000624612 1583 ntBASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNGAP1Q96PV0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RPL23AP57-201ENST00000332361 466 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 Y_RNA.259-201ENST00000364619 101 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 MIR559-201ENST00000385188 96 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 Y_RNA.579-201ENST00000390939 94 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RNA5SP241-201ENST00000391326 114 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RNA5SP44-201ENST00000410446 133 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms