Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 AC083899.1-201ENST00000454465 3819 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 MUC2-202ENST00000613187 4845 ntBASIC5.03□□□□□ -1.6
PTCHD1Q96NR3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC100757.1-201ENST00000616872 1835 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RNA5SP183-201ENST00000362452 119 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 MIR223-201ENST00000385204 110 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.615-201ENST00000410769 117 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RNU2-62P-201ENST00000410868 191 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 CHEK2P3-201ENST00000416118 248 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RPL34P6-201ENST00000432390 345 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 ERLEC1P1-201ENST00000433806 578 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 COPS8P2-201ENST00000473228 627 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RN7SL214P-201ENST00000487317 265 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RPS15AP36-201ENST00000492022 382 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC010632.3-201ENST00000611377 369 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 AC244107.2-201ENST00000611773 76 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 CYP4F35P-202ENST00000636121 390 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 OR55B1P-203ENST00000641518 2602 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 PHKBP1-201ENST00000450951 1951 ntBASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD1Q96NR3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 DHX40P1-201ENST00000588725 1412 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 U3.7-201ENST00000363668 216 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNU1-130P-201ENST00000363930 160 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNU6-171P-201ENST00000384354 107 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNU6-178P-201ENST00000384631 104 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC005522.1-201ENST00000395416 346 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNU6-193P-201ENST00000410977 107 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RPS7P15-201ENST00000415804 584 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL358176.3-201ENST00000420757 454 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC093655.2-201ENST00000425735 631 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL163193.1-201ENST00000444895 788 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RN7SL172P-201ENST00000460535 303 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC058823.1-201ENST00000485315 474 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC020893.1-201ENST00000502452 580 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 FTH1P21-201ENST00000512179 511 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 HMGN1P9-201ENST00000515212 298 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RN7SKP13-201ENST00000515933 244 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNA5SP34-201ENST00000516887 130 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RN7SKP256-201ENST00000517201 314 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 SUMO2P20-201ENST00000520803 283 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC011979.2-201ENST00000527568 352 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC092470.1-201ENST00000546187 132 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms