Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC092470.1-201ENST00000546187 132 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RN7SL176P-201ENST00000580352 264 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL354984.3-201ENST00000604803 325 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC087752.4-201ENST00000605911 462 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC019278.1-201ENST00000623516 479 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL022578.1-201ENST00000439330 1433 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC139713.2-214ENST00000642059 1811 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL133412.1-201ENST00000380194 2992 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 RNU5F-6P-201ENST00000362979 116 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 RNA5SP28-201ENST00000363841 119 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 MIR3074-201ENST00000384885 81 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 SNORD66.1-201ENST00000391230 76 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 TPMTP2-201ENST00000414372 726 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 MTCO3P41-201ENST00000414801 328 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AL161631.1-201ENST00000417933 486 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 RPS27AP7-201ENST00000422792 455 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AL035410.1-201ENST00000427409 427 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 RPL23AP33-201ENST00000442301 452 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 ST13P20-201ENST00000447996 1065 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 MTCO1P27-201ENST00000448269 226 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 PAXBP1P1-201ENST00000449315 447 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 CBX3P3-201ENST00000508108 532 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 HSPA8P13-201ENST00000523715 472 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC013828.2-201ENST00000532487 235 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AGGF1P4-201ENST00000568249 801 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 MIR548AB-201ENST00000584917 84 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC012065.4-201ENST00000602445 679 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC097468.3-201ENST00000607956 456 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC010678.1-201ENST00000614118 713 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 CYP3A51P-201ENST00000633513 256 ntBASIC4.84□□□□□ -1.63
CDK5RAP3Q96JB5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.84□□□□□ -1.64
CDK5RAP3Q96JB5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.84□□□□□ -1.64
CDK5RAP3Q96JB5 Z82217.1-201ENST00000625157 8149 ntBASIC4.84□□□□□ -1.64
CDK5RAP3Q96JB5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 MTND4P26-201ENST00000415971 1359 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 MTND4P4-201ENST00000439033 1366 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 GDI2P1-201ENST00000429312 1336 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RPL23AP57-201ENST00000332361 466 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RN7SKP177-201ENST00000410567 355 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 ELOCP19-201ENST00000411919 318 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 FNDC3CP-201ENST00000420795 1155 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RPS27AP14-201ENST00000422868 454 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RPS29P17-201ENST00000430795 166 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 MTND5P14-201ENST00000441481 1267 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AL512326.1-201ENST00000443050 721 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 USP9YP29-201ENST00000445112 563 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RNA5SP269-201ENST00000459032 137 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC146507.1-201ENST00000468335 354 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RPS26P28-201ENST00000470806 348 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC093767.1-201ENST00000504523 156 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 POU5F1P7-201ENST00000508759 541 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC093840.1-201ENST00000511599 336 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 MTCO2P32-201ENST00000514865 403 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms