Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AP001804.3-201ENST00000525146 880 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC090079.2-201ENST00000575289 768 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 MIR5684-201ENST00000585074 65 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC245036.5-201ENST00000596330 847 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC073387.2-201ENST00000604797 784 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 MIR6867-201ENST00000610636 67 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC253576.2-201ENST00000618815 580 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VMP1Q96GC9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VMP1Q96GC9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC103988.1-201ENST00000566382 2177 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 RNU6-216P-201ENST00000363282 104 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 RPL21P65-201ENST00000406094 466 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 RNU2-42P-201ENST00000410697 113 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 HSPE1P12-201ENST00000412576 301 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 TPT1P2-201ENST00000413105 503 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC245052.5-201ENST00000416320 649 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AL137014.1-201ENST00000420490 1226 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 MUPP-201ENST00000438111 566 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AL645638.1-201ENST00000440519 361 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 RPL39P6-201ENST00000448289 150 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC104308.1-201ENST00000454621 333 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 RPL21P8-201ENST00000465083 535 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 HMGN2P13-201ENST00000476476 274 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 RPL23AP44-201ENST00000482216 473 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 COX7A2P2-201ENST00000505291 250 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 ERHP1-201ENST00000523006 310 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 MTCO1P49-201ENST00000523429 802 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC022690.1-201ENST00000526681 550 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 SETP7-201ENST00000552169 453 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 OR4T1P-201ENST00000554933 911 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 DNAJC19P3-201ENST00000594491 331 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC112220.2-201ENST00000605513 533 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC069545.1-201ENST00000605671 358 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AC008962.1-201ENST00000605729 304 ntBASIC3.81□□□□□ -1.8
VMP1Q96GC9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.81□□□□□ -1.8
VMP1Q96GC9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VMP1Q96GC9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VMP1Q96GC9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VMP1Q96GC9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VMP1Q96GC9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VMP1Q96GC9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VMP1Q96GC9 RPS3AP26-201ENST00000398259 784 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AL356967.1-201ENST00000406305 431 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 RPS15AP38-201ENST00000413110 372 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC007435.1-201ENST00000421086 415 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 OR5BE1P-201ENST00000425977 939 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC004866.2-201ENST00000438285 481 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC083863.1-201ENST00000438811 231 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 RPS4XP4-201ENST00000443195 763 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 OFD1P3Y-201ENST00000453312 783 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 SUMO2P2-201ENST00000456482 255 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC093278.1-201ENST00000494700 600 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 ARL2BPP6-201ENST00000512757 439 ntBASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.8□□□□□ -1.8
VMP1Q96GC9 MED28P6-201ENST00000558776 231 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms