Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORA9-201ENST00000384215 133 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SNORA7.4-201ENST00000384249 137 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 RNU6-1151P-201ENST00000384684 107 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 GLRXP1-201ENST00000423261 334 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 VN1R42P-201ENST00000424651 344 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC010468.1-201ENST00000461022 817 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC012181.1-201ENST00000479895 423 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 RPS27P23-201ENST00000487608 251 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 MTND4LP22-201ENST00000508209 276 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SNORA76.2-201ENST00000517095 137 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC017100.2-201ENST00000584628 355 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC012493.2-201ENST00000595083 291 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 IGHV3-29-201ENST00000604817 344 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AC021851.1-201ENST00000608537 1082 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 ELL2P4-201ENST00000446870 1376 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 AF117829.1-206ENST00000621883 3802 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
ECHDC3Q96DC8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
ECHDC3Q96DC8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AP001350.1-201ENST00000601906 1524 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AL589826.1-201ENST00000340697 249 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 LIPT1P1-201ENST00000415870 1186 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 BX890604.2-201ENST00000427883 474 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RAB11AP1-201ENST00000442978 646 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RPS26P56-201ENST00000444468 240 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RPL7P52-201ENST00000449200 742 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RPS27AP1-201ENST00000475545 471 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 MTCO2P32-201ENST00000514865 403 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 FABP5P12-201ENST00000515543 389 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 ATP5F1P7-201ENST00000567330 760 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AC124312.4-201ENST00000605533 310 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AC100793.4-201ENST00000613683 429 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 uc_338.25-201ENST00000613756 156 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 MIR8057-201ENST00000620957 69 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 AL109659.3-201ENST00000624985 950 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 MTND4P34-201ENST00000572715 1371 ntBASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ECHDC3Q96DC8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 AL672296.1-201ENST00000427780 2158 ntBASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ECHDC3Q96DC8 SNORD56.4-201ENST00000363883 71 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms