Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC097504.1-201ENST00000515103 2415 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 RNA5SP175-201ENST00000364275 119 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 MIR153-1-201ENST00000384914 90 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 MT-TC-201ENST00000387405 66 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 SNORA11F-201ENST00000408237 128 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 RNA5SP36-201ENST00000410197 133 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 MORF4L1P6-201ENST00000418771 268 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC016907.1-201ENST00000419483 435 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC068587.1-201ENST00000483613 781 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC109486.1-201ENST00000486833 374 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC090281.1-201ENST00000523019 276 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC068587.4-201ENST00000533893 186 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 OR8L1P-201ENST00000534005 955 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC113403.1-201ENST00000604910 193 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AL158063.1-201ENST00000615349 536 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AL021997.2-201ENST00000615674 271 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC099669.2-201ENST00000616549 437 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 MIR7702-201ENST00000621931 59 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AP006248.2-201ENST00000623309 592 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 OR11H5P-202ENST00000641612 1325 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 MTND4P16-201ENST00000466108 1367 ntBASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHMP4CQ96CF2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 RNU6-501P-201ENST00000364072 100 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 RNU6-952P-201ENST00000391164 108 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 RPL23AP48-201ENST00000406913 488 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL161631.1-201ENST00000417933 486 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC004975.1-201ENST00000428733 208 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 MTCO2P16-201ENST00000436962 677 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC127537.2-201ENST00000439258 465 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL512326.1-201ENST00000443050 721 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 NUTF2P7-201ENST00000453086 375 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 FTH1P2-201ENST00000466086 412 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL024509.2-201ENST00000493462 493 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC024589.1-201ENST00000512207 263 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 MYL12AP1-201ENST00000518490 515 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL139174.1-201ENST00000531489 886 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC008507.1-201ENST00000587506 734 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC040904.1-201ENST00000590850 223 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 BNIP3P23-201ENST00000599655 511 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 U73023.1-201ENST00000603134 700 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL031775.1-201ENST00000607014 887 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC012360.2-201ENST00000609349 391 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 uc_338.13-201ENST00000618243 179 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC073968.1-201ENST00000618594 637 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL445567.2-201ENST00000618935 498 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AL445363.3-201ENST00000623080 671 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 AC139792.2-201ENST00000624218 587 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms