Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 U7.8-201ENST00000619968 63 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 AC110994.2-201ENST00000635481 492 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOPBP1Q92547 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TOPBP1Q92547 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOPBP1Q92547 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.06□□□□□ -1.76
TOPBP1Q92547 PPIAP17-201ENST00000438507 471 ntBASIC4.06□□□□□ -1.76
TOPBP1Q92547 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.06□□□□□ -1.76
TOPBP1Q92547 AC068657.1-201ENST00000520807 306 ntBASIC4.06□□□□□ -1.76
TOPBP1Q92547 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.06□□□□□ -1.76
TOPBP1Q92547 AP000857.1-201ENST00000532151 543 ntBASIC4.06□□□□□ -1.76
TOPBP1Q92547 AC074029.1-201ENST00000552531 1044 ntBASIC4.06□□□□□ -1.76
TOPBP1Q92547 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TOPBP1Q92547 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.06□□□□□ -1.76
TOPBP1Q92547 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.06□□□□□ -1.76
TOPBP1Q92547 OR4G2P-202ENST00000641004 1759 ntBASIC4.06□□□□□ -1.76
TOPBP1Q92547 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.06□□□□□ -1.76
TOPBP1Q92547 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.06□□□□□ -1.76
TOPBP1Q92547 RPL9P7-201ENST00000330965 580 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 RN7SKP140-201ENST00000411196 284 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 AC025181.1-201ENST00000477507 416 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 AC108860.1-201ENST00000484521 383 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 AC016727.1-205ENST00000605437 569 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 AL161781.1-201ENST00000354277 403 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOPBP1Q92547 GSTA9P-201ENST00000406231 611 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 RPL23AP48-201ENST00000406913 488 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 RNU2-22P-201ENST00000411266 212 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 RPL7P52-201ENST00000449200 742 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 RN7SL499P-201ENST00000481141 276 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 RPL23AP49-201ENST00000492925 468 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.05□□□□□ -1.76
TOPBP1Q92547 AC016542.2-201ENST00000624201 619 ntBASIC4.05□□□□□ -1.76
TOPBP1Q92547 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.04□□□□□ -1.76
TOPBP1Q92547 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOPBP1Q92547 AC107081.1-201ENST00000414975 361 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.04□□□□□ -1.76
TOPBP1Q92547 RN7SKP282-201ENST00000516824 299 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 RN7SKP219-201ENST00000516825 296 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 OR4A45P-201ENST00000529954 901 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.04□□□□□ -1.76
TOPBP1Q92547 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.04□□□□□ -1.76
TOPBP1Q92547 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.04□□□□□ -1.76
TOPBP1Q92547 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.04□□□□□ -1.76
TOPBP1Q92547 VN1R9P-201ENST00000614184 867 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 AC074140.1-201ENST00000621617 208 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 AC009487.2-201ENST00000420969 6821 ntBASIC4.04□□□□□ -1.76
TOPBP1Q92547 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 MTND4P10-201ENST00000446199 1363 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOPBP1Q92547 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOPBP1Q92547 MIR708-201ENST00000390708 88 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 Z98742.2-201ENST00000431564 187 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AL662791.1-201ENST00000441992 928 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 ACTR6P1-201ENST00000514311 1104 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 CKS1BP7-201ENST00000522230 235 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AC092851.1-201ENST00000535964 478 ntBASIC4.03□□□□□ -1.76
TOPBP1Q92547 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TOPBP1Q92547 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.02□□□□□ -1.77
TOPBP1Q92547 MIR181B1-201ENST00000385240 110 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 EIF5P1-201ENST00000400019 1231 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TOPBP1Q92547 AC126182.1-201ENST00000478134 357 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 AC026436.1-201ENST00000510537 270 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 AC107222.1-201ENST00000510899 637 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.02□□□□□ -1.77
TOPBP1Q92547 OR11H5P-201ENST00000554039 926 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 AL109741.3-201ENST00000561748 592 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.02□□□□□ -1.77
TOPBP1Q92547 AL353997.5-201ENST00000618886 171 ntBASIC4.02□□□□□ -1.77
TOPBP1Q92547 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TOPBP1Q92547 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TOPBP1Q92547 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms