Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SNORD3H-201ENST00000384486 214 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 MRPL42P3-201ENST00000401492 326 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 LINC02210-201ENST00000444561 288 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC083899.1-201ENST00000454465 3819 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC026410.2-201ENST00000460281 156 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 MTCYBP40-201ENST00000509390 1135 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC107222.1-201ENST00000510899 637 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 IGKV2-36-201ENST00000519999 223 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC133555.2-201ENST00000550213 292 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 HSPE1P3-201ENST00000559254 309 ntBASIC9.16□□□□□ -0.94
TRIM41Q8WV44 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 TTC41P-205ENST00000551270 3963 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 DDX18P4-201ENST00000511690 1966 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AL137141.1-201ENST00000624622 4836 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 USP9YP4-201ENST00000424401 1745 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 SNORA73.1-201ENST00000363107 205 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RNU6-26P-201ENST00000383985 107 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 Y_RNA.414-201ENST00000384011 101 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RNU6-317P-201ENST00000384031 107 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 Y_RNA.527-201ENST00000384573 102 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RPL36AP36-201ENST00000418616 301 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RPL21P71-201ENST00000465598 459 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RN7SL188P-201ENST00000469842 285 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RN7SKP24-201ENST00000515888 284 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 RNU6-864P-201ENST00000516256 108 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 HMGB1P40-201ENST00000525121 540 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC007224.1-201ENST00000564410 144 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AL390240.1-201ENST00000612950 384 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC091953.5-201ENST00000622919 233 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC073869.8-201ENST00000641806 335 ntBASIC9.15□□□□□ -0.94
TRIM41Q8WV44 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM41Q8WV44 BMPR1APS1-201ENST00000403332 1598 ntBASIC9.15□□□□□ -0.95
TRIM41Q8WV44 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.15□□□□□ -0.95
TRIM41Q8WV44 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC9.15□□□□□ -0.95
TRIM41Q8WV44 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TRIM41Q8WV44 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
TRIM41Q8WV44 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC004076.2-201ENST00000620532 3323 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 MIR548K-201ENST00000408406 116 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 RPL31P12-201ENST00000422587 358 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 PABPC1P3-201ENST00000469174 459 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AP002812.1-201ENST00000495378 474 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 RNU4ATAC8P-201ENST00000516196 109 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 RNU6-388P-201ENST00000517012 105 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 RNU6-389P-201ENST00000517048 105 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC008562.1-201ENST00000521763 330 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 DUX4L52-201ENST00000549363 777 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 MIR4737-201ENST00000583979 81 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 MIR3942-201ENST00000585264 109 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC003973.3-201ENST00000624863 2822 ntBASIC9.14□□□□□ -0.95
TRIM41Q8WV44 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM41Q8WV44 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 240.1 ms