Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DUXAP6-201ENST00000553858 601 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC010735.1-201ENST00000567305 1026 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC109446.2-201ENST00000567872 497 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 MIR4512-201ENST00000583257 77 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC073387.2-201ENST00000604797 784 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC099785.1-201ENST00000605697 437 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC107294.1-201ENST00000609524 467 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC011472.4-201ENST00000615848 491 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC123768.4-201ENST00000616244 701 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC017002.4-201ENST00000604721 1525 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 Z73965.1-201ENST00000623412 2297 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 OR5H2-201ENST00000355273 945 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 Y_RNA.436-201ENST00000384097 102 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 SNORA7.4-201ENST00000384249 137 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 MTCO3P30-201ENST00000426425 670 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 MTND1P20-201ENST00000430341 950 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC005229.2-201ENST00000456995 399 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 RPL21P8-201ENST00000465083 535 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 RAP1BP2-201ENST00000478270 544 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC134050.1-201ENST00000495088 933 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 PRELID3BP7-201ENST00000503606 469 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 SNORD116-26-201ENST00000516006 96 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 NOP56P3-201ENST00000549457 385 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 MIR2682-201ENST00000580305 110 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 VN1R84P-201ENST00000593697 235 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 RPL12P50-201ENST00000603116 116 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 Z82195.1-201ENST00000604558 398 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC107952.2-201ENST00000606048 486 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 AC093673.2-201ENST00000609674 331 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 VN1R9P-201ENST00000614184 867 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 AP002782.1-201ENST00000623107 614 ntBASIC4.05□□□□□ -1.76
SNED1Q8TER0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNED1Q8TER0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SNED1Q8TER0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 RNU6-468P-201ENST00000384003 109 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 RPS24P12-201ENST00000402084 394 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 RNU6-648P-201ENST00000410190 107 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 RNA5SP80-201ENST00000410475 111 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC006989.1-201ENST00000427212 131 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC093422.3-201ENST00000428506 305 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC004022.1-201ENST00000447766 1066 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 RPL21P18-201ENST00000469899 480 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 CYCSP20-201ENST00000473154 315 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC008885.1-201ENST00000514930 301 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC087373.1-201ENST00000524920 491 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 HMGB3P26-201ENST00000560051 582 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC061975.8-201ENST00000587058 721 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC087752.4-201ENST00000605911 462 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 HULC.1-201ENST00000612720 240 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL359715.5-201ENST00000623431 443 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC017037.3-201ENST00000625016 472 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 FRG1DP-201ENST00000635586 771 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 LINC02211-204ENST00000642024 1070 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms