Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL139099.1-201ENST00000497398 403 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-579P-201ENST00000516879 102 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC090502.2-201ENST00000549267 280 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 MTND3P13-201ENST00000574391 343 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC015726.1-201ENST00000602353 681 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL109653.1-201ENST00000603091 248 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RPP40P2-201ENST00000603596 712 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL158163.2-201ENST00000619110 700 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL078595.3-201ENST00000623815 1166 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 MFSD8-245ENST00000641743 948 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 ZNF734P-201ENST00000419494 1534 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC130650.2-201ENST00000618736 2403 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-989P-201ENST00000362756 107 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-251P-201ENST00000363235 104 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-1066P-201ENST00000363573 105 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-629P-201ENST00000384061 103 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC017079.2-201ENST00000416102 485 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC068533.1-201ENST00000418542 415 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RPS15AP6-201ENST00000420703 385 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 OFD1P18Y-201ENST00000420889 959 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC009480.2-201ENST00000422916 432 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC092648.1-201ENST00000425870 423 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC127537.2-201ENST00000439258 465 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 HSPE1P28-201ENST00000443139 211 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 MRPS31P2-201ENST00000451581 518 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC092155.2-201ENST00000454675 477 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC010401.1-201ENST00000463867 348 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 PLGLA-201ENST00000465668 449 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 OR4G11P-201ENST00000492842 939 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC110760.3-202ENST00000515177 371 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RN7SKP116-201ENST00000516902 319 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AP001636.2-201ENST00000525517 696 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC008011.1-201ENST00000545989 227 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC011602.1-201ENST00000546484 331 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL132857.1-201ENST00000555180 708 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC120057.2-201ENST00000571520 271 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL391001.1-201ENST00000602747 715 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC009974.1-201ENST00000608881 455 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 MIR6820-201ENST00000611508 62 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC018816.2-201ENST00000621460 353 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AL512506.2-201ENST00000624472 458 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC068647.1-201ENST00000489539 2265 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms