Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC090819.1-201ENST00000523800 1111 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 OR5M7P-201ENST00000526140 972 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 CENPUP2-201ENST00000555897 1186 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 OR4G1P-201ENST00000588632 938 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 WISP1-OT1-201ENST00000602893 642 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 OR2AS2P-201ENST00000606902 342 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC025588.4-201ENST00000615802 908 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RMST_9.1-201ENST00000619945 193 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC103858.2-201ENST00000621471 543 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL161637.1-201ENST00000622380 412 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC004777.1-201ENST00000624317 287 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL356121.2-201ENST00000624715 780 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RLIMP1-201ENST00000339626 1680 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RNU6-374P-201ENST00000364146 108 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RNU6-723P-201ENST00000383973 107 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 SNORA70E-201ENST00000384492 135 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC025750.1-201ENST00000399891 379 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 MIR1179-201ENST00000408703 91 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RNA5SP39-201ENST00000411245 120 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 SEPT2P1-201ENST00000419651 180 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RPL7P30-201ENST00000420888 709 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AL035410.1-201ENST00000427409 427 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC098826.1-201ENST00000433943 471 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AL356276.2-201ENST00000435919 558 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 MTND4P32-201ENST00000437189 1237 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 SNRPEP7-201ENST00000438350 220 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC009961.3-201ENST00000449832 765 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 ABCF2P2-201ENST00000450549 296 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RPL31P3-201ENST00000458430 332 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RNU7-136P-201ENST00000458819 69 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 MEMO1P3-201ENST00000459811 302 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 PLGLA-201ENST00000465668 449 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC022034.3-201ENST00000471393 478 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC106038.2-201ENST00000520706 568 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC087276.1-201ENST00000529659 480 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 PDCD5P1-201ENST00000543528 309 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 NBR2-204ENST00000587322 63 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AF131215.7-201ENST00000602443 707 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 MTCYBP22-201ENST00000603788 447 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC064807.4-201ENST00000607201 407 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AL031666.3-201ENST00000609320 1006 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC105429.2-201ENST00000610567 517 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 AC019278.1-201ENST00000623516 479 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 Z82217.1-201ENST00000625157 8149 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.85□□□□□ -1.79
BEST3Q8N1M1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BEST3Q8N1M1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 CR381670.1-201ENST00000624291 1693 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms