Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 NF1P5-201ENST00000588287 448 ntBASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 AC012616.1-201ENST00000600294 197 ntBASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 FO393422.1-201ENST00000603908 708 ntBASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 AC133644.2-201ENST00000608142 540 ntBASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 MIR6133-201ENST00000617057 108 ntBASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 AC098657.3-201ENST00000620434 263 ntBASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE3DQ7Z6J8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL137141.1-201ENST00000624622 4836 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 SNORD82-201ENST00000365530 70 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 MIR551A-201ENST00000385042 96 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL360182.1-201ENST00000397433 468 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL139397.2-201ENST00000404529 772 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 Y_RNA.618-201ENST00000410949 107 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RNU6-387P-201ENST00000411331 105 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL133482.1-201ENST00000415988 498 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 ATG3P1-201ENST00000419507 911 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RPL23AP38-201ENST00000423801 469 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 VTI1BP4-201ENST00000427516 527 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC105402.2-201ENST00000438503 358 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC073465.2-201ENST00000440938 498 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 TXNP1-201ENST00000441872 371 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RPL21P133-201ENST00000443666 476 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RPL23AP43-201ENST00000446445 471 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 BTF3P15-201ENST00000455606 336 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RN7SL809P-201ENST00000482040 297 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC079140.5-201ENST00000507882 310 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 PTP4A1P4-201ENST00000512479 322 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RNU6-1088P-201ENST00000516850 104 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 RNA5SP454-201ENST00000517231 127 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL118558.2-201ENST00000556294 238 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC069061.3-201ENST00000582254 823 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AP000769.2-201ENST00000602344 396 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AL157817.1-201ENST00000614264 790 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC132068.1-201ENST00000623805 459 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC022418.1-201ENST00000624118 445 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 Z95327.2-201ENST00000414579 1873 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC009951.1-201ENST00000623674 2614 ntBASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE3DQ7Z6J8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RNU6-593P-201ENST00000364716 112 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 EIF4E2P1-201ENST00000393781 255 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms