Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 RNU6-115P-201ENST00000364310 107 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 RNU5A-2P-201ENST00000384337 116 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 RSL24D1P4-201ENST00000400938 484 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 PRRC2CP1-201ENST00000404428 159 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 USP9YP26-201ENST00000421008 661 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC090960.1-201ENST00000421072 306 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 UBE2V1P1-201ENST00000430836 445 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AL513175.1-201ENST00000431492 780 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC069285.2-201ENST00000440210 275 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 KATNBL1P3-201ENST00000443475 909 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 RPL31P61-201ENST00000496160 376 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC025554.1-201ENST00000505641 188 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC117522.2-201ENST00000510049 657 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 HMGB3P13-201ENST00000511263 607 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC125611.1-201ENST00000549563 229 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC109446.2-201ENST00000567872 497 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC002400.1-201ENST00000569310 726 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 NF1P5-201ENST00000588287 448 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC135507.2-201ENST00000612443 309 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC073348.1-201ENST00000623002 331 ntBASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRT28Q7Z3Y7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.96□□□□□ -1.61
KRT28Q7Z3Y7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 Y_RNA.311-201ENST00000365068 96 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 SNORD17-201ENST00000390930 237 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL590084.2-201ENST00000401481 382 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL136133.1-201ENST00000413694 376 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL593851.1-201ENST00000426171 157 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL031736.2-201ENST00000426573 787 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL512649.1-201ENST00000428997 581 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 HMGB3P9-201ENST00000441799 583 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC239809.1-201ENST00000450470 217 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC010468.1-201ENST00000461022 817 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC010342.1-201ENST00000514047 877 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 MTCO1P30-201ENST00000515244 580 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC087373.1-201ENST00000524920 491 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 MTCYBP27-201ENST00000555160 670 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC090877.1-201ENST00000561418 344 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC138915.2-201ENST00000569776 97 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC106791.2-201ENST00000604680 391 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AL139418.1-201ENST00000613613 177 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 LINC00901.1-201ENST00000617252 152 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AP003399.1-201ENST00000637534 361 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 AC107982.1-201ENST00000507171 1300 ntBASIC4.96□□□□□ -1.62
KRT28Q7Z3Y7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AL118496.1-201ENST00000440201 1812 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms