Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC022164.1-201ENST00000568767 2673 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 Y_RNA.462-201ENST00000384268 102 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-306P-201ENST00000384617 107 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AL121835.1-201ENST00000404250 354 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AL445189.1-201ENST00000405722 338 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 MYL6P5-201ENST00000412707 459 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 RPL30P2-201ENST00000414021 291 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 RPS29P14-201ENST00000431518 171 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 RPL21P8-201ENST00000465083 535 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 ATP5LP5-201ENST00000483050 299 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AC108860.1-201ENST00000484521 383 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 MTCO3P44-201ENST00000510977 541 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AC097486.1-201ENST00000515331 210 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 Y_RNA.64-201ENST00000362845 102 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 Y_RNA.126-201ENST00000363382 111 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-806P-201ENST00000365147 105 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RNA5SP211-201ENST00000365516 117 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 SNORA41-201ENST00000384675 132 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-95P-201ENST00000384697 107 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 HMGN1P24-201ENST00000412282 298 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AC099677.3-201ENST00000427081 395 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 DEFB109F-201ENST00000491870 277 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AC093853.1-201ENST00000515689 483 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RN7SKP288-201ENST00000516227 268 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-1069P-201ENST00000516612 133 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 FAM60DP-201ENST00000524174 632 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL049779.2-201ENST00000553847 315 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AC005899.2-201ENST00000584353 90 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL136313.1-201ENST00000624804 202 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL353662.3-201ENST00000625131 237 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AC000095.2-202ENST00000637415 154 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 THAP12P9-201ENST00000503971 2360 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms