Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC092757.1-201ENST00000467293 467 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AL136126.1-201ENST00000473603 402 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 RN7SL860P-201ENST00000473738 223 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 RPL29P14-201ENST00000495837 428 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 SETP14-201ENST00000497538 873 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC093767.1-201ENST00000504523 156 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 PRELID3BP5-201ENST00000508612 460 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC079171.1-201ENST00000568788 914 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC104662.1-201ENST00000604448 511 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC131235.4-201ENST00000609288 620 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC087683.2-201ENST00000611384 326 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC090246.1-201ENST00000616499 426 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AL590240.3-201ENST00000621416 943 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 PLCE1P1-201ENST00000622094 305 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AC027287.1-201ENST00000553115 1453 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 AF117829.1-206ENST00000621883 3802 ntBASIC3.78□□□□□ -1.8
NUP54Q7Z3B4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 SNRPEP3-201ENST00000338402 276 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 Y_RNA.311-201ENST00000365068 96 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 JKAMPP1-201ENST00000413804 919 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AL008987.1-201ENST00000415528 237 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC004552.1-201ENST00000419089 348 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 ATP5HP2-201ENST00000433885 485 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 BMS1P19-201ENST00000433925 393 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 VN1R10P-201ENST00000447106 875 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 RPL12P26-201ENST00000452430 487 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 MTND1P16-201ENST00000465177 898 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 PABPC1P3-201ENST00000469174 459 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 RPS26P3-201ENST00000470205 348 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC090543.2-201ENST00000483963 348 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC004057.1-201ENST00000485827 348 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 RPL7P38-201ENST00000488396 739 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 OR4G11P-201ENST00000492842 939 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC108064.1-201ENST00000513791 460 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 HNRNPKP5-201ENST00000515300 253 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 RN7SKP13-201ENST00000515933 244 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 MIR2116-201ENST00000517221 80 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AP001636.2-201ENST00000525517 696 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC009712.1-201ENST00000564938 316 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC007599.1-201ENST00000568688 1174 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 RPL23AP87-202ENST00000573039 466 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AL591034.3-201ENST00000605511 685 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 RNU4-89P-201ENST00000607443 133 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 MIR8058-201ENST00000615737 89 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC021755.4-201ENST00000616620 456 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC116618.1-201ENST00000634617 774 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 NUP58P1-201ENST00000502546 1738 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 AC005539.1-201ENST00000443768 1479 ntBASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NUP54Q7Z3B4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC024560.2-201ENST00000507981 1497 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 RNU6-1122P-201ENST00000384449 107 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MIR513A2-201ENST00000385249 127 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 RNU11-4P-201ENST00000391149 133 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms