Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS13CQ709C8 RPL31P12-201ENST00000422587 358 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2□□□□□ -2.09
VPS13CQ709C8 NPM1P49-201ENST00000448027 714 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 RN7SKP43-201ENST00000516173 320 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2□□□□□ -2.09
VPS13CQ709C8 NRBF2P1-201ENST00000587407 859 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 AL110115.1-201ENST00000614396 364 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 AL158196.1-201ENST00000616786 434 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13CQ709C8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13CQ709C8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 MIR1276-201ENST00000408707 83 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 DYNLL1P6-201ENST00000503440 264 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC090281.1-201ENST00000523019 276 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS13CQ709C8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS13CQ709C8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
VPS13CQ709C8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 AL590004.2-201ENST00000404787 371 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC010338.1-201ENST00000621823 717 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
VPS13CQ709C8 RNU1-17P-201ENST00000363022 152 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 Z98742.2-201ENST00000431564 187 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC126182.1-201ENST00000478134 357 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 AP000790.1-201ENST00000528891 737 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC103710.2-201ENST00000609912 942 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 AC104237.2-201ENST00000612456 443 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 OR11H5P-202ENST00000641612 1325 ntBASIC1.99□□□□□ -2.09
VPS13CQ709C8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13CQ709C8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 BX005019.1-201ENST00000561881 1810 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13CQ709C8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 SETP15-201ENST00000412724 337 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 ATG3P1-201ENST00000419507 911 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC068587.2-201ENST00000478386 781 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 RN7SL633P-201ENST00000488974 297 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 RNU6-295P-201ENST00000516901 104 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AP001521.1-201ENST00000609150 300 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13CQ709C8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC107027.3-201ENST00000565095 3473 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC245291.1-201ENST00000419501 328 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 AL354710.1-201ENST00000453641 246 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 RN7SKP219-201ENST00000516825 296 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AL359893.1-201ENST00000447628 1580 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13CQ709C8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13CQ709C8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 MOB1AP2-201ENST00000446060 614 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 NIPA2P2-201ENST00000496376 1083 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS13CQ709C8 AC021733.2-201ENST00000518830 497 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 AP004247.3-201ENST00000608682 624 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 MTND5P29-201ENST00000458676 1807 ntBASIC1.98□□□□□ -2.09
VPS13CQ709C8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13CQ709C8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13CQ709C8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13CQ709C8 GABPAP-201ENST00000419271 1356 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 AL606490.7-201ENST00000433136 191 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13CQ709C8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 FAM92A1P2-202ENST00000504766 877 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 RNA5SP281-201ENST00000516504 135 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 AL591516.1-201ENST00000611326 274 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 MIR6779-201ENST00000617283 64 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13CQ709C8 RNA5SP383-201ENST00000362934 120 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 PTP4A1P7-201ENST00000423476 514 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 ST13P20-201ENST00000447996 1065 ntBASIC1.97□□□□□ -2.09
VPS13CQ709C8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms