Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf139Q6ZV77 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 MTND5P26-201ENST00000426018 1752 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RNY4P24-201ENST00000362735 96 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RNU1-130P-201ENST00000363930 160 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RNU1-85P-201ENST00000364127 164 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RNU6-441P-201ENST00000384545 106 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 SNORA40.3-201ENST00000390964 122 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 SNORA11F-201ENST00000408237 128 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RPL23AP26-201ENST00000412728 464 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 VDAC1P9-201ENST00000412766 841 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 EIF1P1-201ENST00000421436 341 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 OR8F1P-201ENST00000425243 930 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 IPMKP1-201ENST00000425988 855 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 MRPS10P2-201ENST00000431226 381 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL132765.1-201ENST00000434165 553 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC012671.1-201ENST00000451912 203 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 MTCO3P2-201ENST00000457365 171 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RNU7-136P-201ENST00000458819 69 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 KLF3P2-201ENST00000465138 268 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RPL5P30-201ENST00000465511 891 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC010301.1-201ENST00000473936 355 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC126182.1-201ENST00000478134 357 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TMEM251P1-201ENST00000503717 318 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC021678.1-201ENST00000505195 936 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AP003730.1-201ENST00000524605 285 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 MED28P5-201ENST00000528254 438 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AP004247.1-201ENST00000531556 1289 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL133241.1-201ENST00000556832 487 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 TPRKBP2-201ENST00000565969 475 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 PRELID3BP8-201ENST00000604148 295 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC113403.1-201ENST00000604910 193 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 COX6CP4-201ENST00000605798 228 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AP002360.4-201ENST00000606980 481 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL359535.1-201ENST00000612100 1087 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AL355073.2-201ENST00000612106 557 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC000123.2-201ENST00000623124 461 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC140479.6-201ENST00000633535 357 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AC090229.1-201ENST00000590983 1609 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 AP002907.1-201ENST00000606361 1430 ntBASIC3.61□□□□□ -1.83
C9orf139Q6ZV77 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 Y_RNA.582-201ENST00000391023 95 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 RPS26P8-201ENST00000393490 348 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MIR921-201ENST00000401133 56 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 DHFRP6-201ENST00000401776 268 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 HMGB1P17-201ENST00000403495 628 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ZNF603P-201ENST00000405613 487 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 RN7SKP263-201ENST00000411194 309 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AIMP1P1-201ENST00000418670 937 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms