Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC114947.2-201ENST00000565748 2125 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 IMMTP1-201ENST00000435590 2219 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 RN7SKP275-201ENST00000364626 301 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 SNORA77.2-201ENST00000408571 112 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 RNA5SP107-201ENST00000411358 122 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 RNA5SP111-201ENST00000411386 101 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 AL035422.1-201ENST00000414193 397 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 OOSP1P1-201ENST00000423265 274 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 AL133173.1-201ENST00000423458 397 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 AL591704.1-201ENST00000432574 275 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 RFPL4AP3-201ENST00000515267 345 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 RNU6-659P-201ENST00000516454 104 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AP005660.1-201ENST00000522972 293 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC007458.1-201ENST00000542812 373 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC011445.2-201ENST00000599274 173 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 AC109309.2-201ENST00000612597 332 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 MIR6886-201ENST00000619864 61 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
VARS2Q5ST30 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 LPAL2-203ENST00000454031 2498 ntBASIC6.89□□□□□ -1.31
VARS2Q5ST30 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC010401.2-201ENST00000575137 4934 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 AL596244.1-201ENST00000567068 3779 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AKAP17BP-201ENST00000431706 2719 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 HSPA8P4-201ENST00000511877 1920 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 UBE2WP1-201ENST00000362030 340 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 RNU6-946P-201ENST00000383878 107 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 SNORD63-201ENST00000384262 68 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 RNU1-46P-201ENST00000384425 164 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 SNORD73A-201ENST00000386062 65 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 EBAG9P1-201ENST00000418955 543 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC005094.1-201ENST00000440420 368 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC022206.1-201ENST00000495947 347 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC023824.2-201ENST00000566185 400 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 MIR5696-201ENST00000578474 85 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 RN7SL475P-201ENST00000583379 298 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 MIR3976-201ENST00000606807 139 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 AC129915.3-201ENST00000634128 948 ntBASIC6.88□□□□□ -1.31
VARS2Q5ST30 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.88□□□□□ -1.31
VARS2Q5ST30 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VARS2Q5ST30 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
VARS2Q5ST30 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VARS2Q5ST30 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.87□□□□□ -1.31
VARS2Q5ST30 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms