Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP002404.1-201ENST00000532005 451 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AP001029.3-201ENST00000588063 596 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AL161734.1-201ENST00000609720 557 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC104237.2-201ENST00000612456 443 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AL110115.1-201ENST00000614396 364 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC068831.8-201ENST00000620171 435 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC244100.1-202ENST00000621554 382 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC039056.2-201ENST00000622261 511 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC016717.3-201ENST00000624730 554 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 ZNF271P-202ENST00000465539 1970 ntBASIC2.59□□□□□ -2
CCDC58Q4VC31 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC58Q4VC31 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.59□□□□□ -2
CCDC58Q4VC31 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC58Q4VC31 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CCDC58Q4VC31 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC58Q4VC31 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC58Q4VC31 MIR512-1-201ENST00000384913 84 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC025750.1-201ENST00000399891 379 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 HNRNPDP2-201ENST00000406475 478 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.58□□□□□ -2
CCDC58Q4VC31 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.58□□□□□ -2
CCDC58Q4VC31 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC091286.1-201ENST00000431233 461 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 RPS24P8-201ENST00000431490 402 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC58Q4VC31 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AL162389.1-201ENST00000449233 177 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 AC008155.2-201ENST00000464337 397 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 MTND3P6-201ENST00000485242 339 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC022690.1-201ENST00000526681 550 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC093227.2-201ENST00000589357 285 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AC009220.3-201ENST00000604318 586 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC58Q4VC31 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 AL162574.2-201ENST00000614618 657 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 MIR6864-201ENST00000617935 70 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 FRG1DP-201ENST00000635586 771 ntBASIC2.58□□□□□ -2
CCDC58Q4VC31 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.58□□□□□ -2
CCDC58Q4VC31 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC58Q4VC31 SNORA9.2-201ENST00000365361 133 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 RNU1-64P-201ENST00000365443 163 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 RAB28P1-201ENST00000411517 641 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 RPL7P8-201ENST00000411964 730 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC092447.6-201ENST00000414578 210 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.57□□□□□ -2
CCDC58Q4VC31 AL353678.1-201ENST00000422735 741 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC006028.1-201ENST00000438379 402 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 Z75741.1-201ENST00000446793 314 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.57□□□□□ -2
CCDC58Q4VC31 GAPDHP39-201ENST00000481866 979 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.57□□□□□ -2
CCDC58Q4VC31 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.57□□□□□ -2
CCDC58Q4VC31 RN7SKP272-201ENST00000516988 232 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC090136.1-201ENST00000520009 240 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AP003717.3-201ENST00000544832 1180 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.57□□□□□ -2
CCDC58Q4VC31 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.57□□□□□ -2
CCDC58Q4VC31 MIR3605-201ENST00000583214 100 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 PCNAP1-202ENST00000595299 752 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.57□□□□□ -2
CCDC58Q4VC31 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 VIS1.1-201ENST00000610517 203 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC091953.5-201ENST00000622919 233 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC009039.2-201ENST00000624524 529 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 FAM157B-203ENST00000639350 358 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC58Q4VC31 AL512283.1-201ENST00000606756 1384 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 AC026241.1-201ENST00000517873 2142 ntBASIC2.57□□□□□ -2
CCDC58Q4VC31 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC58Q4VC31 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC58Q4VC31 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC58Q4VC31 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC58Q4VC31 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCDC58Q4VC31 SNORD21-201ENST00000383953 95 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 MIR554-201ENST00000384874 96 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 U3.19-201ENST00000390893 196 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 BTBD10P2-201ENST00000404779 676 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 OR51AB1P-201ENST00000429046 620 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms