Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 ELOCP18-201ENST00000434209 337 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 RPL23AP35-201ENST00000451906 501 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 RPL31P13-201ENST00000484151 370 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 RNY4P37-201ENST00000516225 96 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC134698.5-201ENST00000519444 336 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC073544.2-201ENST00000601155 540 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC090948.1-201ENST00000607464 549 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC006329.2-201ENST00000611491 394 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC114781.5-201ENST00000615297 108 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC112200.1-201ENST00000625015 234 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC127502.3-201ENST00000636170 1206 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 AC087190.4-201ENST00000574616 8334 ntBASIC4.95□□□□□ -1.62
LONRF3Q496Y0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LONRF3Q496Y0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC106871.1-201ENST00000568324 3102 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AL672167.1-206ENST00000356293 943 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 RNU4-75P-201ENST00000364621 146 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 CYCSP45-201ENST00000402289 315 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AL356967.1-201ENST00000406305 431 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 MIR1284-201ENST00000408337 120 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 RNA5SP56-201ENST00000410277 118 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 TPMTP3-201ENST00000411928 735 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 RPL7P8-201ENST00000411964 730 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AL356387.2-201ENST00000422272 243 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 ABCF2P2-201ENST00000450549 296 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 SLC31A1P1-201ENST00000451221 567 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 OR6C5P-201ENST00000452388 923 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 PPBPP1-201ENST00000510807 373 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 MTCYBP41-201ENST00000528913 1123 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 OR4P1P-201ENST00000530808 1136 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 OR7K1P-201ENST00000546439 926 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AL512347.1-201ENST00000566420 503 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 MAGOH2P-202ENST00000584384 429 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 MIR3138-201ENST00000585238 82 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 VN1R92P-201ENST00000598511 928 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 BNIP3P11-201ENST00000603878 563 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC048347.1-201ENST00000624621 427 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC090582.1-201ENST00000636321 199 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC099063.3-201ENST00000642066 185 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC092104.1-201ENST00000497346 1441 ntBASIC4.94□□□□□ -1.62
LONRF3Q496Y0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LONRF3Q496Y0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 MTCO1P23-201ENST00000415223 1526 ntBASIC4.93□□□□□ -1.62
LONRF3Q496Y0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.93□□□□□ -1.62
LONRF3Q496Y0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 RNU6-989P-201ENST00000362756 107 ntBASIC4.93□□□□□ -1.62
LONRF3Q496Y0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.93□□□□□ -1.62
LONRF3Q496Y0 RNU6-730P-201ENST00000383954 104 ntBASIC4.93□□□□□ -1.62
LONRF3Q496Y0 Y_RNA.553-201ENST00000384670 102 ntBASIC4.93□□□□□ -1.62
LONRF3Q496Y0 MIR3065-201ENST00000390137 79 ntBASIC4.93□□□□□ -1.62
LONRF3Q496Y0 SNORD66.1-201ENST00000391230 76 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms