Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-256P-201ENST00000516747 97 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 RN7SKP295-201ENST00000517264 153 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AL133153.1-201ENST00000557756 303 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC110588.1-201ENST00000559699 137 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDH1Q08174 MIR4311-201ENST00000580794 100 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL670379.11-201ENST00000604059 253 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL670379.10-201ENST00000604330 253 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL670379.12-201ENST00000605291 253 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL670379.9-201ENST00000605428 253 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC025034.2-201ENST00000623264 286 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL136313.1-201ENST00000624804 202 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC119674.1-207ENST00000641355 633 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PCDH1Q08174 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDH1Q08174 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PCDH1Q08174 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCDH1Q08174 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 AL122126.1-201ENST00000546905 1318 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC144833.1-201ENST00000567953 4089 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 AL121886.1-201ENST00000358609 435 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 RN7SKP185-201ENST00000362813 326 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 Y_RNA.148-201ENST00000363557 117 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDH1Q08174 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AL591848.1-201ENST00000413092 322 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 GNG5P5-201ENST00000420444 220 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC127537.2-201ENST00000439258 465 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 TXNP1-201ENST00000441872 371 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 BTF3P15-201ENST00000455606 336 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 RN7SL809P-201ENST00000482040 297 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 RPS27P27-201ENST00000498779 255 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 COX7A2P2-201ENST00000505291 250 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC017037.2-201ENST00000513850 890 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 RNA5SP271-201ENST00000516700 88 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH1Q08174 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC009902.1-201ENST00000519351 183 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 FAM60DP-201ENST00000524174 632 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.47□□□□□ -1.53
PCDH1Q08174 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC018552.1-201ENST00000562099 811 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AC005341.1-201ENST00000571086 708 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH1Q08174 MIR3672-201ENST00000584290 82 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AF038458.1-201ENST00000588406 262 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC104662.1-201ENST00000604448 511 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 FAM27E4-201ENST00000605259 342 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AL022394.1-201ENST00000606979 292 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AL157817.1-201ENST00000614264 790 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AL096712.1-201ENST00000614561 159 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AC133104.2-201ENST00000615272 193 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AC123768.4-201ENST00000616244 701 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 RN7SL544P-201ENST00000617232 284 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 RN7SL763P-201ENST00000620922 284 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 AC007792.1-201ENST00000623023 402 ntBASIC5.47□□□□□ -1.53
PCDH1Q08174 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDH1Q08174 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PCDH1Q08174 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH1Q08174 AC010329.2-201ENST00000595195 2737 ntBASIC5.46□□□□□ -1.53
PCDH1Q08174 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PCDH1Q08174 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.46□□□□□ -1.53
PCDH1Q08174 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH1Q08174 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms