Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TFF3Q07654 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
TFF3Q07654 SNORD62.1-201ENST00000362541 86 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 U8.9-201ENST00000365667 134 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.28□□□□□ -2.04
TFF3Q07654 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 MIR592-201ENST00000384959 97 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 RN7SKP192-201ENST00000411291 327 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
TFF3Q07654 RPLP0P7-201ENST00000416050 667 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 TRIAP1P1-201ENST00000427062 225 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.28□□□□□ -2.04
TFF3Q07654 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.28□□□□□ -2.04
TFF3Q07654 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AC103975.1-201ENST00000482506 483 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.28□□□□□ -2.04
TFF3Q07654 OR5H5P-201ENST00000503164 928 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AC243972.3-201ENST00000539655 198 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.28□□□□□ -2.04
TFF3Q07654 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.28□□□□□ -2.04
TFF3Q07654 AL391156.1-201ENST00000554965 554 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AC022069.1-201ENST00000582910 658 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 MIR3605-201ENST00000583214 100 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AC007621.1-201ENST00000604544 437 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 AC002076.2-201ENST00000617362 122 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 MIR7843-201ENST00000622274 79 ntBASIC2.28□□□□□ -2.04
TFF3Q07654 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
TFF3Q07654 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TFF3Q07654 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.28□□□□□ -2.05
TFF3Q07654 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.27□□□□□ -2.05
TFF3Q07654 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.27□□□□□ -2.05
TFF3Q07654 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TFF3Q07654 MIR504-201ENST00000385065 83 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 MIR27B-201ENST00000385129 97 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 SEPT7P2-202ENST00000398921 823 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 AC007390.1-201ENST00000415722 356 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 RPL36AP6-201ENST00000435770 321 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 UBE2D3P1-201ENST00000436669 444 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.27□□□□□ -2.05
TFF3Q07654 RPL7P5-201ENST00000471472 736 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.27□□□□□ -2.05
TFF3Q07654 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.27□□□□□ -2.05
TFF3Q07654 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.27□□□□□ -2.05
TFF3Q07654 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TFF3Q07654 AC005046.1-201ENST00000608515 625 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 AL359198.2-201ENST00000611836 194 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 XIST_intron.1-201ENST00000619444 68 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 OR4G1P-202ENST00000641173 1788 ntBASIC2.27□□□□□ -2.05
TFF3Q07654 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.27□□□□□ -2.05
TFF3Q07654 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TFF3Q07654 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.27□□□□□ -2.05
TFF3Q07654 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
TFF3Q07654 RNVU1-3-201ENST00000364313 161 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 RPL7P10-201ENST00000417407 739 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 Z98742.3-201ENST00000418637 326 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 YPEL5P1-201ENST00000419731 367 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 AC233981.1-201ENST00000423224 461 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.26□□□□□ -2.05
TFF3Q07654 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.26□□□□□ -2.05
TFF3Q07654 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.26□□□□□ -2.05
TFF3Q07654 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 AC089999.1-201ENST00000460336 374 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 AC091179.1-201ENST00000461606 579 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 RPS29P21-201ENST00000496272 170 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 ATG10-AS1-201ENST00000504846 648 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 SNORA9.3-201ENST00000516383 129 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.26□□□□□ -2.05
TFF3Q07654 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.26□□□□□ -2.05
TFF3Q07654 AP000873.5-201ENST00000533906 236 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TFF3Q07654 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.26□□□□□ -2.05
TFF3Q07654 AC008126.1-201ENST00000549019 480 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.26□□□□□ -2.05
TFF3Q07654 U4.3-201ENST00000621047 82 ntBASIC2.26□□□□□ -2.05
TFF3Q07654 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
TFF3Q07654 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TFF3Q07654 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TFF3Q07654 AC021755.1-201ENST00000559747 1447 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
TFF3Q07654 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TFF3Q07654 AC109315.1-201ENST00000584143 1347 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TFF3Q07654 AL512633.1-201ENST00000399931 655 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TFF3Q07654 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.25□□□□□ -2.05
TFF3Q07654 RNU4-53P-201ENST00000410828 140 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.25□□□□□ -2.05
TFF3Q07654 CBX1P4-201ENST00000439415 457 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 OR6K1P-201ENST00000456766 971 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.25□□□□□ -2.05
TFF3Q07654 SEPT7P6-201ENST00000469999 1143 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 AC087385.1-201ENST00000475062 312 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 SRIP1-201ENST00000489235 288 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 RN7SKP24-201ENST00000515888 284 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.25□□□□□ -2.05
TFF3Q07654 CKS1BP1-201ENST00000555221 240 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 MIR4635-201ENST00000583759 79 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 AC010928.3-201ENST00000587712 541 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms