Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 ZNF663P-202ENST00000641770 1131 ntBASIC3.35□□□□□ -1.87
TNFRSF17Q02223 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFRSF17Q02223 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFRSF17Q02223 MTCO1P4-201ENST00000520516 1409 ntBASIC3.35□□□□□ -1.87
TNFRSF17Q02223 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFRSF17Q02223 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFRSF17Q02223 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 SNORA62.3-201ENST00000365110 153 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 RN7SKP285-201ENST00000410137 318 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC002075.2-201ENST00000425207 252 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 OSTCP5-201ENST00000425293 453 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 DUTP6-201ENST00000425573 462 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 FO393414.1-201ENST00000428697 1184 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC127537.2-201ENST00000439258 465 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 RPL17P49-201ENST00000443728 411 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 RPS29P31-201ENST00000446147 164 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AL050341.1-201ENST00000447743 313 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 NDUFA5P7-201ENST00000452914 242 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AL136126.1-201ENST00000473603 402 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC017015.1-201ENST00000477387 286 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC026784.1-201ENST00000507986 352 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AP000790.1-201ENST00000528891 737 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 MTCO1P40-201ENST00000574371 625 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 CCDC58P3-201ENST00000590792 430 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 RNVU1-4-201ENST00000612985 164 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFRSF17Q02223 AC012442.3-202ENST00000636742 206 ntBASIC3.34□□□□□ -1.87
TNFRSF17Q02223 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TNFRSF17Q02223 MFSD8-233ENST00000641482 4860 ntBASIC3.34□□□□□ -1.88
TNFRSF17Q02223 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
TNFRSF17Q02223 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TNFRSF17Q02223 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TNFRSF17Q02223 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 RNU6-549P-201ENST00000384433 107 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 MIR184-201ENST00000384962 84 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 SYF2P2-201ENST00000417620 583 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 RPL21P32-201ENST00000419877 477 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 SNRPEP4-201ENST00000435815 279 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 OR51B8P-201ENST00000449892 769 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 RPS23P3-201ENST00000470993 430 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 RPL23AP44-201ENST00000482216 473 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AP002812.1-201ENST00000495378 474 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 SETP14-201ENST00000497538 873 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC011352.3-201ENST00000505162 593 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC048346.1-201ENST00000510247 144 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC026403.1-201ENST00000518938 295 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 OR4R2P-201ENST00000530815 597 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 SNORD39.3-201ENST00000584451 71 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 GAS5-AS1-201ENST00000602767 694 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC009318.4-201ENST00000620496 486 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 AL034408.1-202ENST00000636088 415 ntBASIC3.33□□□□□ -1.88
TNFRSF17Q02223 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms