Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.3□□□□□ -2.04
ABCA4P78363 ZNF861P-201ENST00000588126 639 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 GMCL1P2-201ENST00000605230 823 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA4P78363 MIR7153-201ENST00000637758 57 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 AC109315.1-201ENST00000584143 1347 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ABCA4P78363 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.3□□□□□ -2.04
ABCA4P78363 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ABCA4P78363 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.3□□□□□ -2.04
ABCA4P78363 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
ABCA4P78363 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ABCA4P78363 HMGB3P23-201ENST00000414981 585 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 PTP4A1P5-201ENST00000420305 455 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 GTF2IP23-201ENST00000423746 351 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA4P78363 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA4P78363 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA4P78363 RPL7P31-201ENST00000450192 724 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 AC010468.1-201ENST00000461022 817 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 ST13P14-201ENST00000474095 734 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.3□□□□□ -2.04
ABCA4P78363 SNX5P1-201ENST00000505757 1041 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.3□□□□□ -2.04
ABCA4P78363 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.3□□□□□ -2.04
ABCA4P78363 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.3□□□□□ -2.04
ABCA4P78363 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA4P78363 AC116447.1-201ENST00000613153 453 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 AC241585.2-209ENST00000638217 143 ntBASIC2.3□□□□□ -2.04
ABCA4P78363 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.29□□□□□ -2.04
ABCA4P78363 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
ABCA4P78363 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.29□□□□□ -2.04
ABCA4P78363 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ABCA4P78363 Y_RNA.238-201ENST00000364441 102 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.29□□□□□ -2.04
ABCA4P78363 HMGB3P12-201ENST00000438745 556 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 AC087385.1-201ENST00000475062 312 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.29□□□□□ -2.04
ABCA4P78363 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.29□□□□□ -2.04
ABCA4P78363 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.29□□□□□ -2.04
ABCA4P78363 RNA5SP380-201ENST00000517190 98 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 HPRT1P3-201ENST00000539521 576 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.29□□□□□ -2.04
ABCA4P78363 AL512643.1-201ENST00000635735 524 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
ABCA4P78363 AC066616.2-201ENST00000559334 1481 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.29□□□□□ -2.04
ABCA4P78363 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 RN7SL633P-201ENST00000488974 297 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 CKS1BP2-201ENST00000497342 240 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 RNU6-991P-201ENST00000516168 107 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ABCA4P78363 AC110792.3-201ENST00000595906 1614 ntBASIC2.29□□□□□ -2.04
ABCA4P78363 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA4P78363 AC002546.1-201ENST00000588041 2504 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA4P78363 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA4P78363 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
ABCA4P78363 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA4P78363 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 SNORA36C-201ENST00000384289 132 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 MIR764-201ENST00000390811 85 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 MTND4LP21-201ENST00000415303 295 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 AL137014.1-201ENST00000420490 1226 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.28□□□□□ -2.04
ABCA4P78363 RPL7P12-201ENST00000446719 750 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 RN7SL330P-201ENST00000469709 307 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.28□□□□□ -2.04
ABCA4P78363 AL442163.2-201ENST00000553912 710 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.28□□□□□ -2.04
ABCA4P78363 AC011492.1-201ENST00000600023 315 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.28□□□□□ -2.04
ABCA4P78363 AL355493.4-201ENST00000618530 292 ntBASIC2.28□□□□□ -2.04
ABCA4P78363 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA4P78363 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
ABCA4P78363 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA4P78363 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.28□□□□□ -2.05
ABCA4P78363 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
ABCA4P78363 MAPK10-362ENST00000641864 4484 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 AL079342.1-201ENST00000401460 267 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 RNA5SP274-201ENST00000410484 108 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 TRGV6-201ENST00000417928 299 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 YPEL5P1-201ENST00000419731 367 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.28□□□□□ -2.05
ABCA4P78363 HMGN2P3-201ENST00000433603 273 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 HMGN2P5-201ENST00000436882 273 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 AC245517.2-201ENST00000442890 346 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.28□□□□□ -2.05
ABCA4P78363 TVP23BP2-201ENST00000455082 615 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 TXNP6-201ENST00000510190 310 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 RN7SKP31-201ENST00000516354 278 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.28□□□□□ -2.05
ABCA4P78363 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.28□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms