Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RNA5SP424-201ENST00000390988 115 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 ARF4P3-201ENST00000397387 509 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 SNORA3.3-201ENST00000408712 125 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 RNU2-42P-201ENST00000410697 113 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 RAB9AP3-201ENST00000412737 573 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 EI24P1-201ENST00000416584 867 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AL356320.2-201ENST00000417263 507 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 NANOGP5-201ENST00000424456 877 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 USP9YP24-201ENST00000434374 697 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 EEF1A1P39-201ENST00000440791 250 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 USP9YP17-201ENST00000444617 696 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 RAB9AP1-201ENST00000449393 573 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 MTCO3P16-201ENST00000454456 754 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 SNRPGP5-201ENST00000456003 220 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 DUXAP8-207ENST00000456786 622 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AC011979.1-201ENST00000472300 483 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 HMGN1P11-201ENST00000508668 303 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AC023141.12-201ENST00000512399 199 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC008127.2-201ENST00000549925 1075 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC006960.3-201ENST00000561845 705 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.38□□□□□ -1.87
RPS4XP62701 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 RN7SL339P-201ENST00000580597 296 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS4XP62701 AL159169.3-201ENST00000608871 561 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 DUXAP10-204ENST00000612052 616 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPS4XP62701 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPS4XP62701 GDI2P1-201ENST00000429312 1336 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPS4XP62701 SNORA63.1-201ENST00000362493 131 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 RNU5D-1-201ENST00000363299 116 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 RNU6-560P-201ENST00000364007 108 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
RPS4XP62701 RNU6-837P-201ENST00000391056 108 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 RPL31P1-201ENST00000398116 372 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 ERHP2-201ENST00000402323 299 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 AL513175.2-201ENST00000422071 443 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 MTCYBP11-201ENST00000447254 1109 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC007327.1-201ENST00000447461 264 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.37□□□□□ -1.87
RPS4XP62701 PTGES3P5-201ENST00000455109 434 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 RPL7P49-201ENST00000471402 708 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 GTF2IP9-201ENST00000502460 301 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC093767.1-201ENST00000504523 156 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC010460.2-201ENST00000509054 677 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC005921.1-201ENST00000510589 286 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 RNU6-352P-201ENST00000516908 107 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 IGHV3-32-201ENST00000519182 355 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.37□□□□□ -1.87
RPS4XP62701 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.37□□□□□ -1.87
RPS4XP62701 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.37□□□□□ -1.87
RPS4XP62701 AC007424.1-203ENST00000554613 687 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AL121576.1-201ENST00000556055 276 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC099489.2-201ENST00000574976 260 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 KLKP1-201ENST00000595979 403 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 SNRPGP15-201ENST00000600149 222 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 AC106052.1-201ENST00000608029 497 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.37□□□□□ -1.87
RPS4XP62701 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms