Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AP003497.1-201ENST00000528472 562 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 OR10G5P-201ENST00000532733 358 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AL109766.1-201ENST00000555080 552 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 RN7SL753P-201ENST00000581238 290 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC087283.1-201ENST00000604029 1074 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC112230.1-201ENST00000604342 547 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 Z84480.1-201ENST00000605131 311 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC019193.2-201ENST00000610012 634 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 YWHAEP7-203ENST00000622054 312 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC011460.1-201ENST00000636268 1834 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 AC091046.3-201ENST00000631455 1574 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 Z95327.2-201ENST00000414579 1873 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.43□□□□□ -1.7
CLRN1P58418 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLRN1P58418 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.42□□□□□ -1.7
CLRN1P58418 SAGE4P-201ENST00000442271 3381 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
CLRN1P58418 BTBD10P1-201ENST00000549824 1352 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 RNY3P3-201ENST00000363816 102 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RNVU1-3-201ENST00000364313 161 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 Y_RNA.813-201ENST00000364639 102 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RNU6-359P-201ENST00000365466 108 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLRN1P58418 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 MRPL50P2-201ENST00000416821 482 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 SNRPEP10-201ENST00000420249 274 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 RPL23AP30-201ENST00000432419 501 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC092162.1-201ENST00000432828 434 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AL606489.2-201ENST00000433886 234 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 UBE2V1P13-201ENST00000436983 439 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RPS15AP9-201ENST00000439856 381 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 CALM1P1-201ENST00000442082 433 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 PMCHL2-203ENST00000457791 237 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 MTCO2P29-201ENST00000465212 189 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RPS26P39-201ENST00000469206 341 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC083798.1-201ENST00000472671 131 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC087385.1-201ENST00000475062 312 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.42□□□□□ -1.7
CLRN1P58418 RN7SL319P-201ENST00000480656 221 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 HMGB1P21-201ENST00000502313 581 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CLRN1P58418 LRRC34P2-201ENST00000514850 553 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RNA5SP34-201ENST00000516887 130 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 IGLVIV-53-201ENST00000520107 367 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 CENPUP1-201ENST00000526649 1202 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 BNIP3P1-201ENST00000547295 580 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 SETP2-201ENST00000553886 926 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.42□□□□□ -1.7
CLRN1P58418 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 RPL26P30-202ENST00000602923 645 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AC007566.2-201ENST00000603642 413 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AL158211.4-201ENST00000606988 584 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 EIF3FP1-201ENST00000613970 806 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 AL159972.1-201ENST00000625150 448 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.42□□□□□ -1.7
CLRN1P58418 AC073869.10-201ENST00000642016 354 ntBASIC4.42□□□□□ -1.7
CLRN1P58418 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.42□□□□□ -1.7
CLRN1P58418 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.42□□□□□ -1.7
CLRN1P58418 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLRN1P58418 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.42□□□□□ -1.7
CLRN1P58418 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.42□□□□□ -1.7
CLRN1P58418 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLRN1P58418 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC009902.3-201ENST00000606235 2172 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms