Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS2P54868 AP003117.2-201ENST00000606010 545 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AL121652.1-201ENST00000608851 448 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS2P54868 STMN1P1-201ENST00000617809 440 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AC004943.3-201ENST00000624116 600 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS2P54868 OR4G3P-201ENST00000633500 913 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 RIOK3P1-201ENST00000418778 1528 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HMGCS2P54868 AC022031.1-201ENST00000585985 2593 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS2P54868 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS2P54868 OR1S2-201ENST00000302592 978 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 XIAPP3-201ENST00000312918 795 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 RNA5SP322-201ENST00000363617 119 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 RNU6-298P-201ENST00000390888 96 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 HNRNPDP2-201ENST00000406475 478 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 PRELID3BP11-201ENST00000414230 479 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS2P54868 PTP4A1P7-201ENST00000423476 514 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 OR51B8P-201ENST00000449892 769 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 ELOCP23-201ENST00000452014 332 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 SNRPGP5-201ENST00000456003 220 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 SNORD108-201ENST00000459332 71 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC008427.1-201ENST00000503102 655 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGCS2P54868 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS2P54868 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS2P54868 AC110792.2-201ENST00000510278 224 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS2P54868 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGCS2P54868 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGCS2P54868 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS2P54868 CYB5AP5-201ENST00000549779 389 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC011611.5-201ENST00000552477 578 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AP002906.1-201ENST00000603405 233 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC069304.3-201ENST00000603938 1084 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC069431.2-201ENST00000604149 1099 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC105429.2-201ENST00000610567 517 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AL590240.3-201ENST00000621416 943 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC007998.5-201ENST00000622938 237 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC024595.1-201ENST00000623088 387 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HMGCS2P54868 AL049737.1-201ENST00000413920 1403 ntBASIC3.67□□□□□ -1.82
HMGCS2P54868 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS2P54868 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS2P54868 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HMGCS2P54868 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS2P54868 ZNF33CP-201ENST00000432492 2030 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HMGCS2P54868 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS2P54868 SEC63P2-201ENST00000503863 1939 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGCS2P54868 RNU5E-10P-201ENST00000363506 118 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGCS2P54868 UBE2V1P2-201ENST00000397758 440 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC092638.1-201ENST00000411966 1275 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCS2P54868 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCS2P54868 AC092832.1-201ENST00000422934 400 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS2P54868 RPS26P30-201ENST00000443431 335 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS2P54868 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCS2P54868 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGCS2P54868 RPL21P71-201ENST00000465598 459 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 RPL21P103-201ENST00000479921 488 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS2P54868 RPL7P47-201ENST00000497299 556 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AL035404.1-201ENST00000497982 568 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC008565.1-201ENST00000509046 885 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC026801.2-201ENST00000515352 425 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCS2P54868 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS2P54868 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGCS2P54868 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS2P54868 H3F3AP1-201ENST00000559984 334 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGCS2P54868 ATP5F1P7-201ENST00000567330 760 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCS2P54868 AL392112.1-201ENST00000605115 829 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGCS2P54868 AC022079.2-201ENST00000619739 566 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC022960.3-201ENST00000619794 441 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 C2orf27A-204ENST00000623058 969 ntBASIC3.66□□□□□ -1.82
HMGCS2P54868 AC099654.9-201ENST00000637055 678 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms