Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC103881.1-201ENST00000603476 538 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC3P51654 MIR8058-201ENST00000615737 89 ntBASIC3.82□□□□□ -1.8
GPC3P51654 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC3P51654 AC080188.3-201ENST00000624842 748 ntBASIC3.82□□□□□ -1.8
GPC3P51654 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC3P51654 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 AC007256.1-201ENST00000392253 2765 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 AL672296.1-201ENST00000427780 2158 ntBASIC3.82□□□□□ -1.8
GPC3P51654 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
GPC3P51654 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC3P51654 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GPC3P51654 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GPC3P51654 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.81□□□□□ -1.8
GPC3P51654 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GPC3P51654 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GPC3P51654 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GPC3P51654 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
GPC3P51654 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 MIR491-201ENST00000384877 84 ntBASIC3.81□□□□□ -1.8
GPC3P51654 SNORA40.4-201ENST00000390971 128 ntBASIC3.81□□□□□ -1.8
GPC3P51654 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 BX323014.1-201ENST00000412876 237 ntBASIC3.81□□□□□ -1.8
GPC3P51654 LIPT1P1-201ENST00000415870 1186 ntBASIC3.81□□□□□ -1.8
GPC3P51654 BX664727.1-201ENST00000416024 466 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.81□□□□□ -1.8
GPC3P51654 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 NPM1P13-201ENST00000452663 865 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.81□□□□□ -1.8
GPC3P51654 HMGN2P16-201ENST00000456802 261 ntBASIC3.81□□□□□ -1.8
GPC3P51654 BX510359.1-201ENST00000456973 237 ntBASIC3.81□□□□□ -1.8
GPC3P51654 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.81□□□□□ -1.8
GPC3P51654 RPL32P34-201ENST00000486380 400 ntBASIC3.81□□□□□ -1.8
GPC3P51654 ACTG1P13-201ENST00000486987 1043 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AL024509.2-201ENST00000493462 493 ntBASIC3.81□□□□□ -1.8
GPC3P51654 CAB39P1-201ENST00000502277 460 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC121161.1-201ENST00000510606 652 ntBASIC3.81□□□□□ -1.8
GPC3P51654 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
GPC3P51654 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.81□□□□□ -1.8
GPC3P51654 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GPC3P51654 SYF2P1-201ENST00000550658 413 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 MIR5195-201ENST00000583555 115 ntBASIC3.81□□□□□ -1.8
GPC3P51654 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.81□□□□□ -1.8
GPC3P51654 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 AC022146.1-201ENST00000595307 847 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.81□□□□□ -1.8
GPC3P51654 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AC022149.2-201ENST00000621061 203 ntBASIC3.81□□□□□ -1.8
GPC3P51654 AL356274.2-201ENST00000624379 3752 ntBASIC3.81□□□□□ -1.8
GPC3P51654 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.81□□□□□ -1.8
GPC3P51654 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.8□□□□□ -1.8
GPC3P51654 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GPC3P51654 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GPC3P51654 MTCO1P4-201ENST00000520516 1409 ntBASIC3.8□□□□□ -1.8
GPC3P51654 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GPC3P51654 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GPC3P51654 MTCO2P31-201ENST00000402702 684 ntBASIC3.8□□□□□ -1.8
GPC3P51654 AL583834.1-201ENST00000406943 343 ntBASIC3.8□□□□□ -1.8
GPC3P51654 RNA5SP129-201ENST00000410276 118 ntBASIC3.8□□□□□ -1.8
GPC3P51654 RNA5SP120-201ENST00000410900 112 ntBASIC3.8□□□□□ -1.8
GPC3P51654 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC3P51654 OR1AA1P-201ENST00000419597 916 ntBASIC3.8□□□□□ -1.8
GPC3P51654 DEFB130D-201ENST00000426866 237 ntBASIC3.8□□□□□ -1.8
GPC3P51654 MOB1AP2-201ENST00000446060 614 ntBASIC3.8□□□□□ -1.8
GPC3P51654 RPL7P52-201ENST00000449200 742 ntBASIC3.8□□□□□ -1.8
GPC3P51654 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
GPC3P51654 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC3P51654 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.8□□□□□ -1.8
GPC3P51654 RPL23AP14-201ENST00000468281 468 ntBASIC3.8□□□□□ -1.8
GPC3P51654 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
GPC3P51654 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
GPC3P51654 OR5H5P-201ENST00000503164 928 ntBASIC3.8□□□□□ -1.8
GPC3P51654 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC3P51654 HMGB3P15-201ENST00000507326 574 ntBASIC3.8□□□□□ -1.8
GPC3P51654 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GPC3P51654 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC3P51654 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC3P51654 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC3P51654 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.8□□□□□ -1.8
GPC3P51654 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.8□□□□□ -1.8
GPC3P51654 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GPC3P51654 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.8□□□□□ -1.8
GPC3P51654 AC010735.1-201ENST00000567305 1026 ntBASIC3.8□□□□□ -1.8
GPC3P51654 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.8□□□□□ -1.8
GPC3P51654 MIR3200-201ENST00000580767 85 ntBASIC3.8□□□□□ -1.8
GPC3P51654 RN7SL622P-201ENST00000585292 275 ntBASIC3.8□□□□□ -1.8
GPC3P51654 BNIP3P38-201ENST00000601117 544 ntBASIC3.8□□□□□ -1.8
GPC3P51654 AC098483.2-201ENST00000603158 454 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms