Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.35□□□□□ -1.71
SMARCA4P51532 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.35□□□□□ -1.71
SMARCA4P51532 VN1R48P-201ENST00000448149 1036 ntBASIC4.35□□□□□ -1.71
SMARCA4P51532 AC025181.1-201ENST00000477507 416 ntBASIC4.35□□□□□ -1.71
SMARCA4P51532 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.35□□□□□ -1.71
SMARCA4P51532 NRBF2P1-201ENST00000587407 859 ntBASIC4.35□□□□□ -1.71
SMARCA4P51532 AC074140.1-201ENST00000621617 208 ntBASIC4.35□□□□□ -1.71
SMARCA4P51532 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.35□□□□□ -1.71
SMARCA4P51532 AC009487.4-201ENST00000624969 3585 ntBASIC4.35□□□□□ -1.71
SMARCA4P51532 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SMARCA4P51532 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.34□□□□□ -1.71
SMARCA4P51532 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SMARCA4P51532 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMARCA4P51532 RPL9P7-201ENST00000330965 580 ntBASIC4.34□□□□□ -1.71
SMARCA4P51532 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.34□□□□□ -1.71
SMARCA4P51532 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.34□□□□□ -1.71
SMARCA4P51532 HMGB1P15-201ENST00000453854 435 ntBASIC4.34□□□□□ -1.71
SMARCA4P51532 AC091544.1-201ENST00000484702 348 ntBASIC4.34□□□□□ -1.71
SMARCA4P51532 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.34□□□□□ -1.71
SMARCA4P51532 ACTR6P1-201ENST00000514311 1104 ntBASIC4.34□□□□□ -1.71
SMARCA4P51532 RANP3-201ENST00000530970 276 ntBASIC4.34□□□□□ -1.71
SMARCA4P51532 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.34□□□□□ -1.71
SMARCA4P51532 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.34□□□□□ -1.71
SMARCA4P51532 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.34□□□□□ -1.71
SMARCA4P51532 AL137072.1-201ENST00000603444 466 ntBASIC4.34□□□□□ -1.71
SMARCA4P51532 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SMARCA4P51532 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.33□□□□□ -1.72
SMARCA4P51532 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SMARCA4P51532 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 AMD1P2-201ENST00000412936 992 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 SETP10-201ENST00000424368 814 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.33□□□□□ -1.72
SMARCA4P51532 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.33□□□□□ -1.72
SMARCA4P51532 AC021269.2-201ENST00000532318 330 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.33□□□□□ -1.72
SMARCA4P51532 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.33□□□□□ -1.72
SMARCA4P51532 AC009318.2-201ENST00000610917 651 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 AL136981.2-201ENST00000617319 734 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 FRG1DP-201ENST00000635586 771 ntBASIC4.33□□□□□ -1.72
SMARCA4P51532 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SMARCA4P51532 MAPK10-322ENST00000641485 4530 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMARCA4P51532 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMARCA4P51532 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.32□□□□□ -1.72
SMARCA4P51532 IPMKP1-201ENST00000425988 855 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 RPL23AP74-201ENST00000437246 471 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.32□□□□□ -1.72
SMARCA4P51532 AL662791.1-201ENST00000441992 928 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.32□□□□□ -1.72
SMARCA4P51532 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.32□□□□□ -1.72
SMARCA4P51532 KCTD9P5-201ENST00000504141 1170 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.32□□□□□ -1.72
SMARCA4P51532 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.32□□□□□ -1.72
SMARCA4P51532 MIR5092-201ENST00000583139 88 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 MTND5P19-201ENST00000424872 1794 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SMARCA4P51532 AC117529.2-201ENST00000512159 2068 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.32□□□□□ -1.72
SMARCA4P51532 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMARCA4P51532 EIF5P1-201ENST00000400019 1231 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 RPS27P29-201ENST00000463110 252 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 VN1R17P-201ENST00000472048 1090 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.32□□□□□ -1.72
SMARCA4P51532 CKS1BP7-201ENST00000522230 235 ntBASIC4.32□□□□□ -1.72
SMARCA4P51532 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMARCA4P51532 AC091564.4-201ENST00000533934 2194 ntBASIC4.31□□□□□ -1.72
SMARCA4P51532 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.31□□□□□ -1.72
SMARCA4P51532 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMARCA4P51532 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMARCA4P51532 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SMARCA4P51532 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMARCA4P51532 RPS20P25-201ENST00000412447 352 ntBASIC4.31□□□□□ -1.72
SMARCA4P51532 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.31□□□□□ -1.72
SMARCA4P51532 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.31□□□□□ -1.72
SMARCA4P51532 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.31□□□□□ -1.72
SMARCA4P51532 AL034379.1-201ENST00000423216 253 ntBASIC4.31□□□□□ -1.72
SMARCA4P51532 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.31□□□□□ -1.72
SMARCA4P51532 AC110994.2-201ENST00000635481 492 ntBASIC4.31□□□□□ -1.72
SMARCA4P51532 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SMARCA4P51532 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.3□□□□□ -1.72
SMARCA4P51532 RNU6-253P-201ENST00000384730 105 ntBASIC4.3□□□□□ -1.72
SMARCA4P51532 RNA5SP210-201ENST00000391034 120 ntBASIC4.3□□□□□ -1.72
SMARCA4P51532 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMARCA4P51532 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.3□□□□□ -1.72
SMARCA4P51532 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.3□□□□□ -1.72
SMARCA4P51532 RN7SL297P-201ENST00000483161 293 ntBASIC4.3□□□□□ -1.72
SMARCA4P51532 OR11H5P-201ENST00000554039 926 ntBASIC4.3□□□□□ -1.72
SMARCA4P51532 MIR7153-201ENST00000637758 57 ntBASIC4.3□□□□□ -1.72
SMARCA4P51532 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMARCA4P51532 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMARCA4P51532 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMARCA4P51532 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SMARCA4P51532 AC018634.1-201ENST00000437554 401 ntBASIC4.29□□□□□ -1.72
SMARCA4P51532 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.29□□□□□ -1.72
SMARCA4P51532 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.29□□□□□ -1.72
SMARCA4P51532 LINC00888-204ENST00000487386 421 ntBASIC4.29□□□□□ -1.72
SMARCA4P51532 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.29□□□□□ -1.72
SMARCA4P51532 BNIP3P8-201ENST00000597863 560 ntBASIC4.29□□□□□ -1.72
SMARCA4P51532 AC016727.1-205ENST00000605437 569 ntBASIC4.29□□□□□ -1.72
SMARCA4P51532 AP001005.3-201ENST00000622049 129 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms