Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL159169.3-201ENST00000608871 561 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 OR6R2P-201ENST00000609216 300 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AC083809.1-201ENST00000615051 472 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 MIR7844-201ENST00000616161 122 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AC000123.2-201ENST00000623124 461 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AC091965.5-201ENST00000624785 342 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN9P43378 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN9P43378 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN9P43378 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 ZNF33CP-201ENST00000432492 2030 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PTPN9P43378 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PTPN9P43378 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN9P43378 Y_RNA.77-201ENST00000362962 107 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 RNA5SP88-201ENST00000365560 109 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 SNORA70C-201ENST00000384538 135 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 RPS26P8-201ENST00000393490 348 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AL022722.2-201ENST00000402519 180 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 RNU6-920P-201ENST00000410926 92 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AL356095.1-201ENST00000417217 199 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 MORF4L1P6-201ENST00000418771 268 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN9P43378 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 NANOGP6-201ENST00000429190 847 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 RPL23AP74-201ENST00000437246 471 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN9P43378 GSTA7P-201ENST00000438425 448 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 NDUFS5P3-201ENST00000450668 321 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 AC087385.1-201ENST00000475062 312 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN9P43378 SNORA31.9-201ENST00000516429 84 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AC106038.2-201ENST00000520706 568 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 DEFB109D-201ENST00000529497 240 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN9P43378 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN9P43378 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN9P43378 RPL23AP92-201ENST00000603609 255 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AC007566.2-201ENST00000603642 413 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 AC113194.1-201ENST00000606037 500 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN9P43378 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN9P43378 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN9P43378 U6.101-201ENST00000637707 76 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN9P43378 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN9P43378 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PTPN9P43378 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 GDI2P1-201ENST00000429312 1336 ntBASIC4.21□□□□□ -1.74
PTPN9P43378 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN9P43378 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN9P43378 RNA5SP130-201ENST00000364431 114 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 Y_RNA.560-201ENST00000384689 102 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 ARF4P3-201ENST00000397387 509 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AL021407.1-201ENST00000404531 386 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 MIR1251-201ENST00000408552 70 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 RNA5SP306-201ENST00000411087 107 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC083875.1-201ENST00000419509 405 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPN9P43378 AL391219.1-201ENST00000422570 483 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 OR5BE1P-201ENST00000425977 939 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC244035.1-201ENST00000430042 390 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 ZYG11AP1-201ENST00000430329 837 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 MTND1P20-201ENST00000430341 950 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC011742.1-201ENST00000431448 434 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC129850.1-201ENST00000436203 508 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 MTCO3P16-201ENST00000454456 754 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC109486.1-201ENST00000486833 374 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC082651.2-201ENST00000496833 166 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN9P43378 MTCO3P28-201ENST00000513351 515 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC104986.1-201ENST00000517978 436 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 MTCO1P49-201ENST00000523429 802 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC087276.1-201ENST00000529659 480 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC092851.1-201ENST00000535964 478 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms